Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 AC010460.3-201ENST00000511359 1579 ntBASIC17.76■□□□□ 0.43
MBD1Q9UIS9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 AC073621.1-201ENST00000392730 636 ntBASIC17.76■□□□□ 0.43
MBD1Q9UIS9 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.76■□□□□ 0.43
MBD1Q9UIS9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 AC002347.1-201ENST00000569543 541 ntBASIC17.76■□□□□ 0.43
MBD1Q9UIS9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 AC073592.4-201ENST00000623827 446 ntBASIC17.76■□□□□ 0.43
MBD1Q9UIS9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD1Q9UIS9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 AD001527.2-201ENST00000622994 785 ntBASIC17.75■□□□□ 0.43
MBD1Q9UIS9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD1Q9UIS9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 AC022898.2-201ENST00000616822 1312 ntBASIC17.74■□□□□ 0.43
MBD1Q9UIS9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 AC096633.1-201ENST00000422446 749 ntBASIC17.74■□□□□ 0.43
MBD1Q9UIS9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 DUTP2-201ENST00000519164 463 ntBASIC17.74■□□□□ 0.43
MBD1Q9UIS9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 AC064836.3-201ENST00000607928 673 ntBASIC17.74■□□□□ 0.43
MBD1Q9UIS9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD1Q9UIS9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms