Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR3BQ9NW08 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 HLA-J-201ENST00000462773 1622 ntBASIC18.16■□□□□ 0.5
POLR3BQ9NW08 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 AC067852.2-201ENST00000590513 2313 ntBASIC18.16■□□□□ 0.5
POLR3BQ9NW08 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 FAM220CP-201ENST00000395253 831 ntBASIC18.16■□□□□ 0.5
POLR3BQ9NW08 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.16■□□□□ 0.5
POLR3BQ9NW08 AC004817.3-201ENST00000602957 2129 ntBASIC18.16■□□□□ 0.5
POLR3BQ9NW08 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 AC008764.6-201ENST00000595909 2069 ntBASIC18.15■□□□□ 0.5
POLR3BQ9NW08 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 AC007967.2-201ENST00000432613 625 ntBASIC18.15■□□□□ 0.5
POLR3BQ9NW08 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 AC132938.6-201ENST00000623828 1655 ntBASIC18.15■□□□□ 0.5
POLR3BQ9NW08 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
POLR3BQ9NW08 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.14■□□□□ 0.5
POLR3BQ9NW08 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR3BQ9NW08 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR3BQ9NW08 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR3BQ9NW08 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.14■□□□□ 0.5
POLR3BQ9NW08 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 AC112698.1-201ENST00000510299 916 ntBASIC18.14■□□□□ 0.49
POLR3BQ9NW08 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 MTDHP4-201ENST00000600287 670 ntBASIC18.14■□□□□ 0.49
POLR3BQ9NW08 AL139424.1-201ENST00000607572 797 ntBASIC18.14■□□□□ 0.49
POLR3BQ9NW08 Z83851.2-201ENST00000609564 659 ntBASIC18.14■□□□□ 0.49
POLR3BQ9NW08 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3BQ9NW08 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms