Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 ANAPC2-207ENST00000495611 747 ntTSL 228.5■■■□□ 2.156e-7■□□□□ 10.8
DROSHAQ9NRR4 SLC25A23-204ENST00000593600 834 ntTSL 325.35■■□□□ 1.656e-7■□□□□ 10.8
DROSHAQ9NRR4 SLC25A23-211ENST00000600682 1210 ntTSL 223.54■■□□□ 1.366e-7■□□□□ 10.8
DROSHAQ9NRR4 SLC25A23-206ENST00000595810 734 ntTSL 522.12■■□□□ 1.136e-7■□□□□ 10.8
DROSHAQ9NRR4 SLC25A23-210ENST00000598908 888 ntTSL 320.4■□□□□ 0.866e-7■□□□□ 10.8
DROSHAQ9NRR4 SLC25A23-209ENST00000598704 736 ntTSL 315.69■□□□□ 0.16e-7■□□□□ 10.8
DROSHAQ9NRR4 SLC25A23-213ENST00000601760 271 ntTSL 1 (best)15.4■□□□□ 0.066e-7■□□□□ 10.8
DROSHAQ9NRR4 SLC25A23-212ENST00000601322 526 ntTSL 312.94□□□□□ -0.346e-7■□□□□ 10.8
DROSHAQ9NRR4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.472e-12■□□□□ 10.8
DROSHAQ9NRR4 EML4-207ENST00000480320 1932 ntTSL 23.96□□□□□ -1.784e-7■□□□□ 10.8
DROSHAQ9NRR4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC21.67■■□□□ 1.064e-9■□□□□ 10.8
DROSHAQ9NRR4 HNRNPUL1-206ENST00000594207 816 ntTSL 518.62■□□□□ 0.574e-9■□□□□ 10.8
DROSHAQ9NRR4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC33.65■■■□□ 2.987e-7■□□□□ 10.8
DROSHAQ9NRR4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.977e-7■□□□□ 10.8
DROSHAQ9NRR4 USP32-208ENST00000589335 691 ntTSL 530.4■■■□□ 2.462e-8■□□□□ 10.8
DROSHAQ9NRR4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.192e-8■□□□□ 10.8
DROSHAQ9NRR4 USP32-207ENST00000588898 578 ntTSL 519.28■□□□□ 0.682e-8■□□□□ 10.8
DROSHAQ9NRR4 USP32-202ENST00000393003 1868 ntTSL 1 (best) BASIC17.54■□□□□ 0.42e-8■□□□□ 10.8
DROSHAQ9NRR4 USP32-210ENST00000589761 430 ntTSL 215.96■□□□□ 0.152e-8■□□□□ 10.8
DROSHAQ9NRR4 USP32-211ENST00000590133 2563 ntTSL 215.82■□□□□ 0.122e-8■□□□□ 10.8
DROSHAQ9NRR4 TMEM259-208ENST00000592052 1637 nt37.85■■■■□ 3.651e-6■□□□□ 10.8
DROSHAQ9NRR4 TMEM259-210ENST00000592618 1877 ntTSL 537.1■■■■□ 3.531e-6■□□□□ 10.8
DROSHAQ9NRR4 TMEM259-211ENST00000593068 1965 ntTSL 526.67■■□□□ 1.861e-6■□□□□ 10.8
DROSHAQ9NRR4 ATP5O-210ENST00000496044 673 ntTSL 225.31■■□□□ 1.645e-9■□□□□ 10.8
DROSHAQ9NRR4 ATP5O-207ENST00000487374 469 ntTSL 523.48■■□□□ 1.355e-9■□□□□ 10.8
DROSHAQ9NRR4 ATP5O-208ENST00000491703 2839 ntTSL 219.45■□□□□ 0.75e-9■□□□□ 10.8
DROSHAQ9NRR4 ATP5O-209ENST00000495005 586 ntTSL 216.15■□□□□ 0.185e-9■□□□□ 10.8
DROSHAQ9NRR4 ATP5O-201ENST00000290299 932 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.095e-9■□□□□ 10.8
DROSHAQ9NRR4 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.075e-9■□□□□ 10.8
DROSHAQ9NRR4 ATP5O-205ENST00000431254 583 ntTSL 215.43■□□□□ 0.065e-9■□□□□ 10.8
DROSHAQ9NRR4 ATP5O-206ENST00000484627 157 ntTSL 1 (best)11.14□□□□□ -0.635e-9■□□□□ 10.8
DROSHAQ9NRR4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC9.37□□□□□ -0.915e-31■□□□□ 10.8
DROSHAQ9NRR4 CTSB-229ENST00000533572 975 ntTSL 326.2■■□□□ 1.795e-7■□□□□ 10.8
DROSHAQ9NRR4 CTSB-215ENST00000528965 556 ntTSL 324.5■■□□□ 1.515e-7■□□□□ 10.8
DROSHAQ9NRR4 SLC25A23-201ENST00000264088 2056 ntTSL 1 (best)36.7■■■■□ 3.475e-7■□□□□ 10.8
DROSHAQ9NRR4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.295e-7■□□□□ 10.8
DROSHAQ9NRR4 FGFR1-219ENST00000475621 485 ntTSL 216.41■□□□□ 0.221e-7■□□□□ 10.8
DROSHAQ9NRR4 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.461e-7■□□□□ 10.8
DROSHAQ9NRR4 ZNF337-203ENST00000481610 572 ntTSL 39.98□□□□□ -0.811e-7■□□□□ 10.8
DROSHAQ9NRR4 MZT2B-207ENST00000485869 583 ntTSL 235.08■■■■□ 3.211e-9■□□□□ 10.8
DROSHAQ9NRR4 SEPT5-215ENST00000490204 774 ntTSL 531.63■■■□□ 2.651e-9■□□□□ 10.8
DROSHAQ9NRR4 HIST1H2BJ-203ENST00000607124 950 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.31e-13■□□□□ 10.8
DROSHAQ9NRR4 HIST1H2BJ-202ENST00000606923 408 ntTSL 311.1□□□□□ -0.631e-13■□□□□ 10.8
DROSHAQ9NRR4 PIM3-202ENST00000467480 723 ntTSL 248.3■■■■■ 5.323e-7■□□□□ 10.8
DROSHAQ9NRR4 NPRL3-213ENST00000621703 2812 ntTSL 1 (best)23.73■■□□□ 1.398e-7■□□□□ 10.8
DROSHAQ9NRR4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.338e-7■□□□□ 10.8
DROSHAQ9NRR4 NPRL3-214ENST00000622194 2981 ntTSL 523.03■■□□□ 1.288e-7■□□□□ 10.8
DROSHAQ9NRR4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.89■■□□□ 1.18e-7■□□□□ 10.8
DROSHAQ9NRR4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.858e-7■□□□□ 10.8
DROSHAQ9NRR4 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.31e-7■□□□□ 10.8
DROSHAQ9NRR4 NCL-202ENST00000356936 890 ntTSL 326.32■■□□□ 1.81e-23■□□□□ 10.8
DROSHAQ9NRR4 NCL-207ENST00000461347 3967 ntTSL 218.9■□□□□ 0.621e-23■□□□□ 10.8
DROSHAQ9NRR4 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.51e-23■□□□□ 10.8
DROSHAQ9NRR4 NCL-208ENST00000466274 671 ntTSL 29.75□□□□□ -0.851e-23■□□□□ 10.8
DROSHAQ9NRR4 SNORD20-201ENST00000384550 80 ntBASIC-3.66□□□□□ -31e-23■□□□□ 10.8
DROSHAQ9NRR4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.373e-7■□□□□ 10.8
DROSHAQ9NRR4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC23.41■■□□□ 1.343e-7■□□□□ 10.8
DROSHAQ9NRR4 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 329.87■■■□□ 2.372e-23■□□□□ 10.7
DROSHAQ9NRR4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.322e-23■□□□□ 10.7
DROSHAQ9NRR4 SRSF4-206ENST00000605204 1399 ntTSL 1 (best)29.52■■■□□ 2.322e-23■□□□□ 10.7
DROSHAQ9NRR4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.026e-55■□□□□ 10.7
DROSHAQ9NRR4 NCAPD2-202ENST00000382457 2844 ntTSL 514.93□□□□□ -0.026e-55■□□□□ 10.7
DROSHAQ9NRR4 NCAPD2-207ENST00000539084 4290 ntTSL 214.65□□□□□ -0.066e-55■□□□□ 10.7
DROSHAQ9NRR4 NCAPD2-208ENST00000539714 533 ntTSL 310.58□□□□□ -0.726e-55■□□□□ 10.7
DROSHAQ9NRR4 NCAPD2-210ENST00000541399 584 ntTSL 510.42□□□□□ -0.746e-55■□□□□ 10.7
DROSHAQ9NRR4 SCARNA10-201ENST00000459255 330 ntBASIC7.09□□□□□ -1.276e-55■□□□□ 10.7
DROSHAQ9NRR4 AC006064.5-201ENST00000541782 248 ntBASIC6.53□□□□□ -1.366e-55■□□□□ 10.7
DROSHAQ9NRR4 TMEM9-210ENST00000495205 971 ntTSL 519.89■□□□□ 0.775e-7■□□□□ 10.7
DROSHAQ9NRR4 TMEM9-207ENST00000455367 487 ntTSL 517.12■□□□□ 0.335e-7■□□□□ 10.7
DROSHAQ9NRR4 FASN-210ENST00000636968 100 ntTSL 525.93■■□□□ 1.746e-9■□□□□ 10.7
DROSHAQ9NRR4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.929e-26■□□□□ 10.7
DROSHAQ9NRR4 SMAD4-213ENST00000591914 992 ntTSL 341.85■■■■■ 4.293e-7■□□□□ 10.7
DROSHAQ9NRR4 SLC25A23-205ENST00000595267 742 ntTSL 239.32■■■■□ 3.883e-7■□□□□ 10.7
DROSHAQ9NRR4 HP1BP3-209ENST00000437575 473 ntTSL 338.86■■■■□ 3.813e-7■□□□□ 10.7
DROSHAQ9NRR4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC38.21■■■■□ 3.713e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-221ENST00000514588 490 ntTSL 437.78■■■■□ 3.643e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC37.68■■■■□ 3.623e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC35.56■■■■□ 3.283e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.273e-7■□□□□ 10.7
DROSHAQ9NRR4 AL355987.4-202ENST00000459985 1900 ntTSL 234.55■■■■□ 3.123e-9■□□□□ 10.7
DROSHAQ9NRR4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC33.39■■■□□ 2.943e-7■□□□□ 10.7
DROSHAQ9NRR4 TCIRG1-215ENST00000533947 956 ntTSL 532.5■■■□□ 2.793e-7■□□□□ 10.7
DROSHAQ9NRR4 HP1BP3-211ENST00000443615 557 ntTSL 332.24■■■□□ 2.753e-7■□□□□ 10.7
DROSHAQ9NRR4 HP1BP3-210ENST00000438032 1159 ntTSL 532.2■■■□□ 2.753e-7■□□□□ 10.7
DROSHAQ9NRR4 TCIRG1-216ENST00000534673 848 ntTSL 331.58■■■□□ 2.653e-7■□□□□ 10.7
DROSHAQ9NRR4 TCIRG1-209ENST00000529657 842 ntTSL 531.37■■■□□ 2.613e-7■□□□□ 10.7
DROSHAQ9NRR4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC30.55■■■□□ 2.483e-7■□□□□ 10.7
DROSHAQ9NRR4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.423e-7■□□□□ 10.7
DROSHAQ9NRR4 TCIRG1-206ENST00000527530 529 ntTSL 330.11■■■□□ 2.413e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-212ENST00000510058 926 ntTSL 229.93■■■□□ 2.383e-7■□□□□ 10.7
DROSHAQ9NRR4 HP1BP3-206ENST00000419490 538 ntTSL 429.21■■■□□ 2.273e-7■□□□□ 10.7
DROSHAQ9NRR4 AC091551.1-202ENST00000588256 526 ntTSL 428.89■■■□□ 2.223e-7■□□□□ 10.7
DROSHAQ9NRR4 TCIRG1-202ENST00000524598 940 ntTSL 528.82■■■□□ 2.23e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-208ENST00000505672 932 ntTSL 228.29■■■□□ 2.123e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC28.29■■■□□ 2.123e-7■□□□□ 10.7
DROSHAQ9NRR4 HP1BP3-208ENST00000424732 970 ntTSL 328.24■■■□□ 2.113e-7■□□□□ 10.7
DROSHAQ9NRR4 MIGA2-211ENST00000492279 901 ntTSL 328.22■■■□□ 2.113e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-209ENST00000505884 592 ntTSL 428.18■■■□□ 2.13e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-211ENST00000508143 574 ntTSL 428.18■■■□□ 2.13e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-214ENST00000511161 579 ntTSL 428.18■■■□□ 2.13e-7■□□□□ 10.7
Retrieved 100 of 16,331 protein–RNA pairs in 69.2 ms