Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 AC104076.2-201ENST00000448912 469 ntBASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 AC063952.2-201ENST00000498792 1227 ntBASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 RN7SL850P-201ENST00000579959 291 ntBASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 AL353692.3-201ENST00000407031 1396 ntBASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 TMPOP1-202ENST00000424642 1267 ntBASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 AC022616.7-201ENST00000525383 220 ntBASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC68Q9H2F9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC68Q9H2F9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms