Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.24■□□□□ 0.03
GFI1Q99684 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
GFI1Q99684 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GFI1Q99684 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.24■□□□□ 0.03
GFI1Q99684 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
GFI1Q99684 UNC93B2-201ENST00000285383 730 ntBASIC15.24■□□□□ 0.03
GFI1Q99684 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.24■□□□□ 0.03
GFI1Q99684 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
GFI1Q99684 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.24■□□□□ 0.03
GFI1Q99684 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.24■□□□□ 0.03
GFI1Q99684 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
GFI1Q99684 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
GFI1Q99684 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.24■□□□□ 0.03
GFI1Q99684 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
GFI1Q99684 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
GFI1Q99684 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.24■□□□□ 0.03
GFI1Q99684 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
GFI1Q99684 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.24■□□□□ 0.03
GFI1Q99684 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GFI1Q99684 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.24■□□□□ 0.03
GFI1Q99684 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
GFI1Q99684 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GFI1Q99684 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.23■□□□□ 0.03
GFI1Q99684 BX276092.7-203ENST00000637198 1536 ntBASIC15.23■□□□□ 0.03
GFI1Q99684 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.23■□□□□ 0.03
GFI1Q99684 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 PRORSD1P-201ENST00000295112 541 ntBASIC15.23■□□□□ 0.03
GFI1Q99684 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 AC098590.1-201ENST00000468126 897 ntBASIC15.23■□□□□ 0.03
GFI1Q99684 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.23■□□□□ 0.03
GFI1Q99684 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.23■□□□□ 0.03
GFI1Q99684 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
GFI1Q99684 AP001412.1-201ENST00000608405 714 ntBASIC15.23■□□□□ 0.03
GFI1Q99684 AL139327.4-201ENST00000612362 153 ntBASIC15.23■□□□□ 0.03
GFI1Q99684 ITM2C-210ENST00000620962 501 ntBASIC15.23■□□□□ 0.03
GFI1Q99684 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.23■□□□□ 0.03
GFI1Q99684 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.23■□□□□ 0.03
GFI1Q99684 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.23■□□□□ 0.03
GFI1Q99684 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.23■□□□□ 0.03
GFI1Q99684 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.23■□□□□ 0.03
GFI1Q99684 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.23■□□□□ 0.03
GFI1Q99684 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.23■□□□□ 0.03
GFI1Q99684 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GFI1Q99684 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
GFI1Q99684 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.22■□□□□ 0.03
GFI1Q99684 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.22■□□□□ 0.03
GFI1Q99684 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GFI1Q99684 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.22■□□□□ 0.03
GFI1Q99684 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.22■□□□□ 0.03
GFI1Q99684 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
GFI1Q99684 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.22■□□□□ 0.03
GFI1Q99684 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.22■□□□□ 0.03
GFI1Q99684 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.22■□□□□ 0.03
GFI1Q99684 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GFI1Q99684 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.22■□□□□ 0.03
GFI1Q99684 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms