Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 AC005332.8-201ENST00000622750 2735 ntBASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 AL845331.1-201ENST00000424978 1190 ntBASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC144NLQ6NUI1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 AC100803.2-201ENST00000562459 1963 ntBASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 NUS1P1-201ENST00000446295 882 ntBASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 AC096582.2-201ENST00000510860 516 ntBASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 PRELID1P1-202ENST00000567272 903 ntBASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 LINC01711-201ENST00000598340 967 ntBASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 AC009949.1-201ENST00000623048 1830 ntBASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC144NLQ6NUI1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CCDC144NLQ6NUI1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC144NLQ6NUI1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CCDC144NLQ6NUI1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CCDC144NLQ6NUI1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC144NLQ6NUI1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC144NLQ6NUI1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC144NLQ6NUI1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms