Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.75■□□□□ 0.75
LBX1P52954 AL590787.1-201ENST00000568856 1315 ntBASIC19.75■□□□□ 0.75
LBX1P52954 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.74■□□□□ 0.75
LBX1P52954 BNIP3P42-201ENST00000454982 569 ntBASIC19.74■□□□□ 0.75
LBX1P52954 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.74■□□□□ 0.75
LBX1P52954 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.74■□□□□ 0.75
LBX1P52954 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.74■□□□□ 0.75
LBX1P52954 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 STK25P1-201ENST00000585406 838 ntBASIC19.74■□□□□ 0.75
LBX1P52954 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.74■□□□□ 0.75
LBX1P52954 BNIP3P29-201ENST00000598302 571 ntBASIC19.74■□□□□ 0.75
LBX1P52954 AC011447.5-201ENST00000616168 564 ntBASIC19.74■□□□□ 0.75
LBX1P52954 MIR6727-201ENST00000620702 65 ntBASIC19.74■□□□□ 0.75
LBX1P52954 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.74■□□□□ 0.75
LBX1P52954 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LBX1P52954 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.74■□□□□ 0.75
LBX1P52954 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LBX1P52954 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
LBX1P52954 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LBX1P52954 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LBX1P52954 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LBX1P52954 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LBX1P52954 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.73■□□□□ 0.75
LBX1P52954 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.73■□□□□ 0.75
LBX1P52954 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LBX1P52954 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LBX1P52954 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.73■□□□□ 0.75
LBX1P52954 AC234783.1-201ENST00000441761 496 ntBASIC19.73■□□□□ 0.75
LBX1P52954 AC009477.1-201ENST00000452936 217 ntBASIC19.73■□□□□ 0.75
LBX1P52954 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LBX1P52954 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.73■□□□□ 0.75
LBX1P52954 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.73■□□□□ 0.75
LBX1P52954 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.73■□□□□ 0.75
LBX1P52954 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.73■□□□□ 0.75
LBX1P52954 AC009407.1-201ENST00000568958 598 ntBASIC19.73■□□□□ 0.75
LBX1P52954 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LBX1P52954 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LBX1P52954 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.73■□□□□ 0.75
LBX1P52954 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
LBX1P52954 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LBX1P52954 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LBX1P52954 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LBX1P52954 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.72■□□□□ 0.75
LBX1P52954 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LBX1P52954 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.72■□□□□ 0.75
LBX1P52954 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LBX1P52954 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.72■□□□□ 0.75
LBX1P52954 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LBX1P52954 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LBX1P52954 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LBX1P52954 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.72■□□□□ 0.75
LBX1P52954 TTTY23B-201ENST00000442790 549 ntBASIC19.72■□□□□ 0.75
LBX1P52954 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.72■□□□□ 0.75
LBX1P52954 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LBX1P52954 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.72■□□□□ 0.75
LBX1P52954 SNX29P1-201ENST00000548357 1007 ntBASIC19.72■□□□□ 0.75
LBX1P52954 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LBX1P52954 WASH4P-201ENST00000564273 1246 ntBASIC19.72■□□□□ 0.75
LBX1P52954 AC103810.3-201ENST00000583567 96 ntBASIC19.72■□□□□ 0.75
LBX1P52954 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LBX1P52954 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LBX1P52954 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LBX1P52954 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LBX1P52954 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
LBX1P52954 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LBX1P52954 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.72■□□□□ 0.75
LBX1P52954 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LBX1P52954 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.71■□□□□ 0.75
LBX1P52954 AC020907.1-201ENST00000616460 1350 ntBASIC19.71■□□□□ 0.75
LBX1P52954 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LBX1P52954 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LBX1P52954 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.71■□□□□ 0.75
LBX1P52954 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LBX1P52954 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms