Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GTF2A1P52655 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.36■□□□□ 0.37
GTF2A1P52655 AC100803.2-201ENST00000562459 1963 ntBASIC17.36■□□□□ 0.37
GTF2A1P52655 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GTF2A1P52655 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GTF2A1P52655 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GTF2A1P52655 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.36■□□□□ 0.37
GTF2A1P52655 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GTF2A1P52655 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GTF2A1P52655 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.36■□□□□ 0.37
GTF2A1P52655 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 AC015656.1-201ENST00000624209 3578 ntBASIC17.35■□□□□ 0.37
GTF2A1P52655 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.35■□□□□ 0.37
GTF2A1P52655 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
GTF2A1P52655 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.35■□□□□ 0.37
GTF2A1P52655 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GTF2A1P52655 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.35■□□□□ 0.37
GTF2A1P52655 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.35■□□□□ 0.37
GTF2A1P52655 AC010536.3-201ENST00000620306 533 ntBASIC17.35■□□□□ 0.37
GTF2A1P52655 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
GTF2A1P52655 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.35■□□□□ 0.37
GTF2A1P52655 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GTF2A1P52655 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GTF2A1P52655 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GTF2A1P52655 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GTF2A1P52655 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GTF2A1P52655 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
GTF2A1P52655 PHGDH-210ENST00000641115 1638 ntBASIC17.35■□□□□ 0.37
GTF2A1P52655 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
GTF2A1P52655 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC17.35■□□□□ 0.37
GTF2A1P52655 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.35■□□□□ 0.37
GTF2A1P52655 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.35■□□□□ 0.37
GTF2A1P52655 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2A1P52655 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
GTF2A1P52655 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
GTF2A1P52655 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
GTF2A1P52655 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.34■□□□□ 0.37
GTF2A1P52655 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2A1P52655 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2A1P52655 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2A1P52655 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2A1P52655 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.34■□□□□ 0.37
GTF2A1P52655 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2A1P52655 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2A1P52655 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2A1P52655 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.34■□□□□ 0.37
GTF2A1P52655 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
GTF2A1P52655 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
GTF2A1P52655 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GTF2A1P52655 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2A1P52655 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.34■□□□□ 0.37
GTF2A1P52655 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GTF2A1P52655 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.34■□□□□ 0.37
GTF2A1P52655 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2A1P52655 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
GTF2A1P52655 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2A1P52655 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.34■□□□□ 0.37
GTF2A1P52655 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
GTF2A1P52655 SBF1P1-201ENST00000444527 5631 ntBASIC17.34■□□□□ 0.37
GTF2A1P52655 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2A1P52655 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
GTF2A1P52655 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2A1P52655 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2A1P52655 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2A1P52655 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2A1P52655 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.33■□□□□ 0.37
GTF2A1P52655 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.33■□□□□ 0.37
GTF2A1P52655 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GTF2A1P52655 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GTF2A1P52655 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2A1P52655 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2A1P52655 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.33■□□□□ 0.37
GTF2A1P52655 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2A1P52655 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GTF2A1P52655 AC139749.1-202ENST00000617529 3139 ntBASIC17.33■□□□□ 0.37
GTF2A1P52655 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2A1P52655 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2A1P52655 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GTF2A1P52655 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GTF2A1P52655 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.33■□□□□ 0.36
GTF2A1P52655 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
GTF2A1P52655 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GTF2A1P52655 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GTF2A1P52655 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GTF2A1P52655 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
GTF2A1P52655 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.33■□□□□ 0.36
GTF2A1P52655 AL365203.3-201ENST00000609742 2057 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms