Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CKS2P33552 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CKS2P33552 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS2P33552 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.03□□□□□ -0.32
CKS2P33552 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CKS2P33552 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CKS2P33552 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CKS2P33552 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS2P33552 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CKS2P33552 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
CKS2P33552 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS2P33552 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS2P33552 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CKS2P33552 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS2P33552 AC091390.4-202ENST00000476426 537 ntBASIC13.03□□□□□ -0.32
CKS2P33552 CKBP1-201ENST00000565489 1086 ntBASIC13.03□□□□□ -0.32
CKS2P33552 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.03□□□□□ -0.32
CKS2P33552 MIR4758-201ENST00000577688 71 ntBASIC13.03□□□□□ -0.32
CKS2P33552 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS2P33552 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.03□□□□□ -0.32
CKS2P33552 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.03□□□□□ -0.32
CKS2P33552 AL445675.2-201ENST00000620291 557 ntBASIC13.03□□□□□ -0.32
CKS2P33552 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS2P33552 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 LINC00304-203ENST00000565008 1864 ntBASIC13.03□□□□□ -0.32
CKS2P33552 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS2P33552 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
CKS2P33552 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.03□□□□□ -0.32
CKS2P33552 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CKS2P33552 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS2P33552 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS2P33552 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.02□□□□□ -0.32
CKS2P33552 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CKS2P33552 LINC01126-201ENST00000623515 1646 ntBASIC13.02□□□□□ -0.32
CKS2P33552 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CKS2P33552 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CKS2P33552 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CKS2P33552 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CKS2P33552 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.02□□□□□ -0.32
CKS2P33552 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CKS2P33552 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CKS2P33552 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CKS2P33552 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CKS2P33552 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.02□□□□□ -0.33
CKS2P33552 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 MIR663A-201ENST00000385250 93 ntBASIC13.02□□□□□ -0.33
CKS2P33552 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CKS2P33552 SLC29A4P1-201ENST00000398760 971 ntBASIC13.02□□□□□ -0.33
CKS2P33552 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.02□□□□□ -0.33
CKS2P33552 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.02□□□□□ -0.33
CKS2P33552 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.02□□□□□ -0.33
CKS2P33552 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.02□□□□□ -0.33
CKS2P33552 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CKS2P33552 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CKS2P33552 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.02□□□□□ -0.33
CKS2P33552 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CKS2P33552 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.02□□□□□ -0.33
CKS2P33552 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 AL391005.1-201ENST00000623953 2435 ntBASIC13.02□□□□□ -0.33
CKS2P33552 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.02□□□□□ -0.33
CKS2P33552 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.02□□□□□ -0.33
CKS2P33552 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CKS2P33552 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.02□□□□□ -0.33
CKS2P33552 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS2P33552 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.01□□□□□ -0.33
CKS2P33552 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms