Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HIST1H1DP16402 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H1DP16402 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
HIST1H1DP16402 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H1DP16402 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
HIST1H1DP16402 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H1DP16402 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H1DP16402 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15□□□□□ -0.01
HIST1H1DP16402 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H1DP16402 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H1DP16402 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HIST1H1DP16402 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H1DP16402 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
HIST1H1DP16402 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1DP16402 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 LYSMD4-203ENST00000378904 2122 ntBASIC14.99□□□□□ -0.01
HIST1H1DP16402 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 MIR1238-201ENST00000408483 83 ntBASIC14.99□□□□□ -0.01
HIST1H1DP16402 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 NEK4P2-201ENST00000580004 1012 ntBASIC14.99□□□□□ -0.01
HIST1H1DP16402 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H1DP16402 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1DP16402 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.98□□□□□ -0.01
HIST1H1DP16402 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1DP16402 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1DP16402 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HIST1H1DP16402 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.98□□□□□ -0.01
HIST1H1DP16402 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HIST1H1DP16402 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
HIST1H1DP16402 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms