Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 AC108751.1-201ENST00000490852 363 ntBASIC20.77■□□□□ 0.92
HLA-DOAP06340 PGAM5P1-201ENST00000518923 814 ntBASIC20.77■□□□□ 0.92
HLA-DOAP06340 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DOAP06340 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DOAP06340 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DOAP06340 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DOAP06340 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DOAP06340 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
HLA-DOAP06340 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
HLA-DOAP06340 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
HLA-DOAP06340 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.77■□□□□ 0.91
HLA-DOAP06340 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HLA-DOAP06340 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.77■□□□□ 0.91
HLA-DOAP06340 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.77■□□□□ 0.91
HLA-DOAP06340 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
HLA-DOAP06340 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DOAP06340 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DOAP06340 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.76■□□□□ 0.91
HLA-DOAP06340 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DOAP06340 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DOAP06340 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DOAP06340 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-DOAP06340 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DOAP06340 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HLA-DOAP06340 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-DOAP06340 RNA5SP416-201ENST00000516838 111 ntBASIC20.76■□□□□ 0.91
HLA-DOAP06340 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HLA-DOAP06340 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.76■□□□□ 0.91
HLA-DOAP06340 AC139530.3-201ENST00000620344 690 ntBASIC20.76■□□□□ 0.91
HLA-DOAP06340 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.76■□□□□ 0.91
HLA-DOAP06340 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-DOAP06340 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DOAP06340 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DOAP06340 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DOAP06340 AC009113.1-201ENST00000570267 2443 ntBASIC20.76■□□□□ 0.91
HLA-DOAP06340 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HLA-DOAP06340 AC009336.1-201ENST00000608941 1553 ntBASIC20.76■□□□□ 0.91
HLA-DOAP06340 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DOAP06340 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DOAP06340 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 AC104581.1-202ENST00000635932 2618 ntBASIC20.75■□□□□ 0.91
HLA-DOAP06340 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.75■□□□□ 0.91
HLA-DOAP06340 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HLA-DOAP06340 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HLA-DOAP06340 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
HLA-DOAP06340 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.75■□□□□ 0.91
HLA-DOAP06340 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.75■□□□□ 0.91
HLA-DOAP06340 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.75■□□□□ 0.91
HLA-DOAP06340 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.75■□□□□ 0.91
HLA-DOAP06340 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DOAP06340 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
HLA-DOAP06340 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HLA-DOAP06340 HTR7P1-202ENST00000624664 4411 ntBASIC20.74■□□□□ 0.91
HLA-DOAP06340 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-DOAP06340 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-DOAP06340 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.74■□□□□ 0.91
HLA-DOAP06340 MIR1233-2-201ENST00000408138 82 ntBASIC20.74■□□□□ 0.91
HLA-DOAP06340 MIR1233-1-201ENST00000408722 82 ntBASIC20.74■□□□□ 0.91
HLA-DOAP06340 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-DOAP06340 AC007967.2-201ENST00000432613 625 ntBASIC20.74■□□□□ 0.91
HLA-DOAP06340 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HLA-DOAP06340 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-DOAP06340 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-DOAP06340 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 AC006504.4-201ENST00000592118 1568 ntBASIC20.74■□□□□ 0.91
HLA-DOAP06340 AL139424.1-201ENST00000607572 797 ntBASIC20.74■□□□□ 0.91
HLA-DOAP06340 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.74■□□□□ 0.91
HLA-DOAP06340 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-DOAP06340 AC138028.4-201ENST00000564984 1845 ntBASIC20.74■□□□□ 0.91
HLA-DOAP06340 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms