Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ZBED1O96006 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZBED1O96006 NUS1P2-201ENST00000417358 873 ntBASIC18.7■□□□□ 0.58
ZBED1O96006 TSPY19P-201ENST00000418461 509 ntBASIC18.7■□□□□ 0.58
ZBED1O96006 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZBED1O96006 TSPY18P-201ENST00000441642 509 ntBASIC18.7■□□□□ 0.58
ZBED1O96006 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.7■□□□□ 0.58
ZBED1O96006 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZBED1O96006 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZBED1O96006 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.7■□□□□ 0.58
ZBED1O96006 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.7■□□□□ 0.58
ZBED1O96006 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.7■□□□□ 0.58
ZBED1O96006 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.7■□□□□ 0.58
ZBED1O96006 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.7■□□□□ 0.58
ZBED1O96006 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZBED1O96006 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZBED1O96006 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ZBED1O96006 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZBED1O96006 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.7■□□□□ 0.58
ZBED1O96006 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZBED1O96006 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.69■□□□□ 0.58
ZBED1O96006 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.69■□□□□ 0.58
ZBED1O96006 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.69■□□□□ 0.58
ZBED1O96006 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.69■□□□□ 0.58
ZBED1O96006 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.69■□□□□ 0.58
ZBED1O96006 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.69■□□□□ 0.58
ZBED1O96006 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.69■□□□□ 0.58
ZBED1O96006 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
ZBED1O96006 KRT16P4-201ENST00000453883 522 ntBASIC18.69■□□□□ 0.58
ZBED1O96006 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.69■□□□□ 0.58
ZBED1O96006 KRT18P31-201ENST00000506277 1292 ntBASIC18.69■□□□□ 0.58
ZBED1O96006 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 KRT126P-201ENST00000549467 1181 ntBASIC18.69■□□□□ 0.58
ZBED1O96006 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.69■□□□□ 0.58
ZBED1O96006 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 AC091304.2-201ENST00000564639 760 ntBASIC18.69■□□□□ 0.58
ZBED1O96006 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.69■□□□□ 0.58
ZBED1O96006 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 AC114341.1-201ENST00000618070 349 ntBASIC18.69■□□□□ 0.58
ZBED1O96006 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZBED1O96006 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
ZBED1O96006 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.68■□□□□ 0.58
ZBED1O96006 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
ZBED1O96006 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 RCN1P2-201ENST00000398357 915 ntBASIC18.68■□□□□ 0.58
ZBED1O96006 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ZBED1O96006 AC007967.3-201ENST00000434308 558 ntBASIC18.68■□□□□ 0.58
ZBED1O96006 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.68■□□□□ 0.58
ZBED1O96006 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.68■□□□□ 0.58
ZBED1O96006 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 AC011467.2-201ENST00000598425 242 ntBASIC18.68■□□□□ 0.58
ZBED1O96006 AL732292.2-201ENST00000609649 430 ntBASIC18.68■□□□□ 0.58
ZBED1O96006 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
ZBED1O96006 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ZBED1O96006 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZBED1O96006 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 AC009949.1-201ENST00000623048 1830 ntBASIC18.67■□□□□ 0.58
ZBED1O96006 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.67■□□□□ 0.58
ZBED1O96006 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ZBED1O96006 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms