Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RFPL1O75677 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
RFPL1O75677 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
RFPL1O75677 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RFPL1O75677 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.75■□□□□ 0.43
RFPL1O75677 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.75■□□□□ 0.43
RFPL1O75677 DDX43P3-201ENST00000441064 443 ntBASIC17.75■□□□□ 0.43
RFPL1O75677 KRT18P38-201ENST00000449496 1282 ntBASIC17.75■□□□□ 0.43
RFPL1O75677 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.75■□□□□ 0.43
RFPL1O75677 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.75■□□□□ 0.43
RFPL1O75677 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.75■□□□□ 0.43
RFPL1O75677 AL157888.1-201ENST00000631930 593 ntBASIC17.75■□□□□ 0.43
RFPL1O75677 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RFPL1O75677 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.74■□□□□ 0.43
RFPL1O75677 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RFPL1O75677 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
RFPL1O75677 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.74■□□□□ 0.43
RFPL1O75677 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RFPL1O75677 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.74■□□□□ 0.43
RFPL1O75677 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.74■□□□□ 0.43
RFPL1O75677 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.74■□□□□ 0.43
RFPL1O75677 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.74■□□□□ 0.43
RFPL1O75677 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 AL136038.3-201ENST00000561909 1096 ntBASIC17.74■□□□□ 0.43
RFPL1O75677 NEK4P2-201ENST00000580004 1012 ntBASIC17.74■□□□□ 0.43
RFPL1O75677 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RFPL1O75677 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.74■□□□□ 0.43
RFPL1O75677 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.74■□□□□ 0.43
RFPL1O75677 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.74■□□□□ 0.43
RFPL1O75677 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RFPL1O75677 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFPL1O75677 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RFPL1O75677 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RFPL1O75677 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.73■□□□□ 0.43
RFPL1O75677 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.73■□□□□ 0.43
RFPL1O75677 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RFPL1O75677 AC112907.2-201ENST00000448639 330 ntBASIC17.73■□□□□ 0.43
RFPL1O75677 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.73■□□□□ 0.43
RFPL1O75677 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
RFPL1O75677 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.73■□□□□ 0.43
RFPL1O75677 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.73■□□□□ 0.43
RFPL1O75677 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.73■□□□□ 0.43
RFPL1O75677 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.73■□□□□ 0.43
RFPL1O75677 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RFPL1O75677 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.73■□□□□ 0.43
RFPL1O75677 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFPL1O75677 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RFPL1O75677 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms