Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 RN7SL606P-201ENST00000472779 293 ntBASIC16.69■□□□□ 0.26
PLOD3O60568 GUSBP12-201ENST00000513727 720 ntBASIC16.69■□□□□ 0.26
PLOD3O60568 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
PLOD3O60568 KRT8P26-201ENST00000534154 1276 ntBASIC16.69■□□□□ 0.26
PLOD3O60568 AC087388.1-201ENST00000571370 1112 ntBASIC16.69■□□□□ 0.26
PLOD3O60568 AC116407.4-201ENST00000623319 1061 ntBASIC16.69■□□□□ 0.26
PLOD3O60568 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.69■□□□□ 0.26
PLOD3O60568 AC012317.2-201ENST00000623305 2251 ntBASIC16.69■□□□□ 0.26
PLOD3O60568 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.69■□□□□ 0.26
PLOD3O60568 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PLOD3O60568 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PLOD3O60568 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PLOD3O60568 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PLOD3O60568 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PLOD3O60568 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PLOD3O60568 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.69■□□□□ 0.26
PLOD3O60568 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.69■□□□□ 0.26
PLOD3O60568 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PLOD3O60568 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PLOD3O60568 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PLOD3O60568 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PLOD3O60568 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
PLOD3O60568 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.68■□□□□ 0.26
PLOD3O60568 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
PLOD3O60568 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
PLOD3O60568 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PLOD3O60568 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.68■□□□□ 0.26
PLOD3O60568 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PLOD3O60568 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PLOD3O60568 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.68■□□□□ 0.26
PLOD3O60568 DDX43P3-201ENST00000441064 443 ntBASIC16.68■□□□□ 0.26
PLOD3O60568 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PLOD3O60568 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.68■□□□□ 0.26
PLOD3O60568 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.68■□□□□ 0.26
PLOD3O60568 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.68■□□□□ 0.26
PLOD3O60568 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.68■□□□□ 0.26
PLOD3O60568 AC090616.6-201ENST00000582640 721 ntBASIC16.68■□□□□ 0.26
PLOD3O60568 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.68■□□□□ 0.26
PLOD3O60568 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PLOD3O60568 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.68■□□□□ 0.26
PLOD3O60568 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
PLOD3O60568 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PLOD3O60568 PRORSD1P-202ENST00000563365 2154 ntBASIC16.68■□□□□ 0.26
PLOD3O60568 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
PLOD3O60568 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.68■□□□□ 0.26
PLOD3O60568 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
PLOD3O60568 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PLOD3O60568 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PLOD3O60568 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.67■□□□□ 0.26
PLOD3O60568 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PLOD3O60568 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.67■□□□□ 0.26
PLOD3O60568 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.67■□□□□ 0.26
PLOD3O60568 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.67■□□□□ 0.26
PLOD3O60568 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
PLOD3O60568 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.67■□□□□ 0.26
PLOD3O60568 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.67■□□□□ 0.26
PLOD3O60568 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PLOD3O60568 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.67■□□□□ 0.26
PLOD3O60568 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.67■□□□□ 0.26
PLOD3O60568 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.67■□□□□ 0.26
PLOD3O60568 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PLOD3O60568 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PLOD3O60568 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PLOD3O60568 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.66■□□□□ 0.26
PLOD3O60568 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PLOD3O60568 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms