Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCP110O43303 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.46■□□□□ 0.71
CCP110O43303 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCP110O43303 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCP110O43303 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCP110O43303 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.46■□□□□ 0.71
CCP110O43303 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCP110O43303 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCP110O43303 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCP110O43303 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.46■□□□□ 0.71
CCP110O43303 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.46■□□□□ 0.71
CCP110O43303 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCP110O43303 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.46■□□□□ 0.71
CCP110O43303 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.46■□□□□ 0.71
CCP110O43303 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCP110O43303 AC046158.3-201ENST00000624947 2558 ntBASIC19.46■□□□□ 0.71
CCP110O43303 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCP110O43303 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.46■□□□□ 0.71
CCP110O43303 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.46■□□□□ 0.71
CCP110O43303 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCP110O43303 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCP110O43303 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
CCP110O43303 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCP110O43303 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCP110O43303 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCP110O43303 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.46■□□□□ 0.71
CCP110O43303 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCP110O43303 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCP110O43303 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.46■□□□□ 0.71
CCP110O43303 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.46■□□□□ 0.71
CCP110O43303 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCP110O43303 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 AC105020.1-201ENST00000435356 2205 ntBASIC19.45■□□□□ 0.7
CCP110O43303 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.45■□□□□ 0.7
CCP110O43303 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCP110O43303 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CCP110O43303 AC106886.4-201ENST00000623557 2502 ntBASIC19.45■□□□□ 0.7
CCP110O43303 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
CCP110O43303 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.45■□□□□ 0.7
CCP110O43303 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCP110O43303 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.45■□□□□ 0.7
CCP110O43303 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCP110O43303 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.45■□□□□ 0.7
CCP110O43303 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CCP110O43303 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.45■□□□□ 0.7
CCP110O43303 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.45■□□□□ 0.7
CCP110O43303 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCP110O43303 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.45■□□□□ 0.7
CCP110O43303 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCP110O43303 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.44■□□□□ 0.7
CCP110O43303 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CCP110O43303 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCP110O43303 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.44■□□□□ 0.7
CCP110O43303 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.44■□□□□ 0.7
CCP110O43303 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.44■□□□□ 0.7
CCP110O43303 AC010653.2-201ENST00000623505 997 ntBASIC19.44■□□□□ 0.7
CCP110O43303 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.44■□□□□ 0.7
CCP110O43303 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCP110O43303 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
CCP110O43303 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.44■□□□□ 0.7
CCP110O43303 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCP110O43303 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCP110O43303 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.44■□□□□ 0.7
CCP110O43303 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CCP110O43303 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCP110O43303 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCP110O43303 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCP110O43303 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CCP110O43303 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.43■□□□□ 0.7
CCP110O43303 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms