Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 AC068418.2-201ENST00000577309 3703 ntBASIC17.03■□□□□ 0.32
GSC2O15499 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 LYSMD4-203ENST00000378904 2122 ntBASIC17.02■□□□□ 0.32
GSC2O15499 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.02■□□□□ 0.32
GSC2O15499 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.02■□□□□ 0.32
GSC2O15499 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 SLC29A4P1-201ENST00000398760 971 ntBASIC17.02■□□□□ 0.32
GSC2O15499 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.02■□□□□ 0.32
GSC2O15499 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.02■□□□□ 0.32
GSC2O15499 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.02■□□□□ 0.32
GSC2O15499 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.02■□□□□ 0.32
GSC2O15499 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
GSC2O15499 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.02■□□□□ 0.32
GSC2O15499 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GSC2O15499 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
GSC2O15499 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.02■□□□□ 0.31
GSC2O15499 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GSC2O15499 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
GSC2O15499 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GSC2O15499 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GSC2O15499 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.02■□□□□ 0.31
GSC2O15499 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
GSC2O15499 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GSC2O15499 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GSC2O15499 FAM207BP-201ENST00000447172 505 ntBASIC17.01■□□□□ 0.31
GSC2O15499 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
GSC2O15499 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.01■□□□□ 0.31
GSC2O15499 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.01■□□□□ 0.31
GSC2O15499 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.01■□□□□ 0.31
GSC2O15499 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GSC2O15499 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.01■□□□□ 0.31
GSC2O15499 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.01■□□□□ 0.31
GSC2O15499 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GSC2O15499 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17■□□□□ 0.31
GSC2O15499 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
GSC2O15499 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17■□□□□ 0.31
GSC2O15499 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
GSC2O15499 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
GSC2O15499 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
GSC2O15499 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
GSC2O15499 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 CROCCP5-201ENST00000436658 830 ntBASIC17■□□□□ 0.31
GSC2O15499 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17■□□□□ 0.31
GSC2O15499 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GSC2O15499 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17■□□□□ 0.31
GSC2O15499 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17■□□□□ 0.31
GSC2O15499 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17■□□□□ 0.31
GSC2O15499 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms