Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM42Q8IWZ5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM42Q8IWZ5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 WWOX-216ENST00000569818 525 ntBASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 KRT17P2-201ENST00000300992 1314 ntBASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM42Q8IWZ5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 AC016396.2-201ENST00000562575 1417 ntBASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 FAM197Y1-201ENST00000421178 764 ntBASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 CD177P1-201ENST00000606252 935 ntBASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 AL162727.3-201ENST00000635661 2787 ntBASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM42Q8IWZ5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms