Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 AC026271.2-201ENST00000428091 497 ntBASIC14.75□□□□□ -0.05
ZNF546Q86UE3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 AC026185.1-201ENST00000445748 174 ntBASIC14.75□□□□□ -0.05
ZNF546Q86UE3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 PNMA6B-201ENST00000538162 1200 ntBASIC14.75□□□□□ -0.05
ZNF546Q86UE3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 AC120498.8-201ENST00000614275 531 ntBASIC14.75□□□□□ -0.05
ZNF546Q86UE3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 HLA-A-209ENST00000638375 975 ntBASIC14.75□□□□□ -0.05
ZNF546Q86UE3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 LINC00304-203ENST00000565008 1864 ntBASIC14.75□□□□□ -0.05
ZNF546Q86UE3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ZNF546Q86UE3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 POU5F1P3-201ENST00000428824 1078 ntBASIC14.74□□□□□ -0.05
ZNF546Q86UE3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 AC022517.1-201ENST00000592429 346 ntBASIC14.74□□□□□ -0.05
ZNF546Q86UE3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 AC005052.1-201ENST00000625181 2492 ntBASIC14.74□□□□□ -0.05
ZNF546Q86UE3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF546Q86UE3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 SLC29A4P1-201ENST00000398760 971 ntBASIC14.73□□□□□ -0.05
ZNF546Q86UE3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 AC097658.1-201ENST00000475555 843 ntBASIC14.73□□□□□ -0.05
ZNF546Q86UE3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 MIR4758-201ENST00000577688 71 ntBASIC14.73□□□□□ -0.05
ZNF546Q86UE3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ZNF546Q86UE3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms