Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.69□□□□□ -0.066e-7■□□□□ 8.4
SND1Q7KZF4 TMEM14B-218ENST00000491103 871 ntTSL 514.3□□□□□ -0.121e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.96□□□□□ -0.171e-6■□□□□ 8.4
SND1Q7KZF4 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.181e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.76□□□□□ -0.211e-6■□□□□ 8.4
SND1Q7KZF4 AUP1-208ENST00000486234 984 ntTSL 513.65□□□□□ -0.221e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.62□□□□□ -0.231e-6■□□□□ 8.4
SND1Q7KZF4 OCIAD1-215ENST00000508996 348 ntTSL 413.58□□□□□ -0.241e-6■□□□□ 8.4
SND1Q7KZF4 MCM7-205ENST00000463722 1327 ntTSL 512.94□□□□□ -0.341e-6■□□□□ 8.4
SND1Q7KZF4 OCIAD1-219ENST00000509664 538 ntTSL 512.93□□□□□ -0.341e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-211ENST00000473807 559 ntTSL 412.86□□□□□ -0.351e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-213ENST00000478732 344 ntTSL 512.66□□□□□ -0.381e-6■□□□□ 8.4
SND1Q7KZF4 OCIAD1-217ENST00000509164 563 ntTSL 412.46□□□□□ -0.411e-6■□□□□ 8.4
SND1Q7KZF4 USMG5-202ENST00000337003 560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.431e-6■□□□□ 8.4
SND1Q7KZF4 RUVBL2-212ENST00000627972 1065 ntTSL 5 BASIC11.54□□□□□ -0.561e-6■□□□□ 8.4
SND1Q7KZF4 USMG5-204ENST00000369815 626 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.641e-6■□□□□ 8.4
SND1Q7KZF4 TMEM14B-205ENST00000463100 502 ntTSL 411.05□□□□□ -0.641e-6■□□□□ 8.4
SND1Q7KZF4 COPS6-208ENST00000474823 752 ntTSL 210.96□□□□□ -0.651e-6■□□□□ 8.4
SND1Q7KZF4 OCIAD1-212ENST00000507546 496 ntTSL 210.64□□□□□ -0.711e-6■□□□□ 8.4
SND1Q7KZF4 MDH2-208ENST00000492663 546 ntTSL 210.38□□□□□ -0.754e-11■□□□□ 8.4
SND1Q7KZF4 PRPF8-203ENST00000571958 380 ntTSL 310.37□□□□□ -0.751e-6■□□□□ 8.4
SND1Q7KZF4 AUP1-203ENST00000462297 457 ntTSL 310.29□□□□□ -0.761e-6■□□□□ 8.4
SND1Q7KZF4 CD37-207ENST00000595660 559 ntTSL 49.36□□□□□ -0.911e-6■□□□□ 8.4
SND1Q7KZF4 COPS6-204ENST00000426712 716 ntTSL 39.16□□□□□ -0.941e-6■□□□□ 8.4
SND1Q7KZF4 DNAJA1-203ENST00000495015 604 ntTSL 38.09□□□□□ -1.111e-6■□□□□ 8.4
SND1Q7KZF4 CD37-214ENST00000598134 566 ntTSL 47.49□□□□□ -1.211e-6■□□□□ 8.4
SND1Q7KZF4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.261e-6■□□□□ 8.4
SND1Q7KZF4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.291e-6■□□□□ 8.4
SND1Q7KZF4 MDH2-206ENST00000461665 551 ntTSL 26.75□□□□□ -1.334e-11■□□□□ 8.4
SND1Q7KZF4 TMEM14B-207ENST00000467229 483 ntTSL 36.66□□□□□ -1.341e-6■□□□□ 8.4
SND1Q7KZF4 COPS6-209ENST00000483891 734 ntTSL 36.27□□□□□ -1.411e-6■□□□□ 8.4
SND1Q7KZF4 DNAJA1-202ENST00000465677 505 ntTSL 24.67□□□□□ -1.661e-6■□□□□ 8.4
SND1Q7KZF4 ACTL6A-205ENST00000467383 174 ntTSL 31.14□□□□□ -2.231e-6■□□□□ 8.4
SND1Q7KZF4 ALDOA-220ENST00000566846 512 ntTSL 212.29□□□□□ -0.441e-18■□□□□ 8.3
SND1Q7KZF4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.25■■□□□ 1.632e-8■□□□□ 8.3
SND1Q7KZF4 RAD21-209ENST00000523547 908 ntTSL 323.35■■□□□ 1.332e-8■□□□□ 8.3
SND1Q7KZF4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.49■□□□□ 0.552e-8■□□□□ 8.3
SND1Q7KZF4 RAD21-208ENST00000522699 548 ntTSL 317.64■□□□□ 0.412e-8■□□□□ 8.3
SND1Q7KZF4 RAD21-202ENST00000517485 874 ntTSL 315.55■□□□□ 0.082e-8■□□□□ 8.3
SND1Q7KZF4 EPB41-203ENST00000349460 3029 ntTSL 1 (best) BASIC11.38□□□□□ -0.592e-8■□□□□ 8.3
SND1Q7KZF4 EPB41-207ENST00000373800 2853 ntTSL 1 (best) BASIC11.29□□□□□ -0.62e-8■□□□□ 8.3
SND1Q7KZF4 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.72e-8■□□□□ 8.3
SND1Q7KZF4 RAD21-206ENST00000519837 515 ntTSL 410.62□□□□□ -0.712e-8■□□□□ 8.3
SND1Q7KZF4 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC10.35□□□□□ -0.752e-8■□□□□ 8.3
SND1Q7KZF4 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.762e-8■□□□□ 8.3
SND1Q7KZF4 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC9.75□□□□□ -0.852e-8■□□□□ 8.3
SND1Q7KZF4 RAD21-205ENST00000519469 549 ntTSL 29.45□□□□□ -0.92e-8■□□□□ 8.3
SND1Q7KZF4 RAD21-207ENST00000520992 831 ntTSL 48.82□□□□□ -12e-8■□□□□ 8.3
SND1Q7KZF4 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.012e-8■□□□□ 8.3
SND1Q7KZF4 SAT1-207ENST00000474223 1033 ntTSL 28.48□□□□□ -1.052e-8■□□□□ 8.3
SND1Q7KZF4 EPB41-213ENST00000636666 3642 ntTSL 57.57□□□□□ -1.22e-8■□□□□ 8.3
SND1Q7KZF4 SAT1-205ENST00000462639 826 ntTSL 26.83□□□□□ -1.322e-8■□□□□ 8.3
SND1Q7KZF4 SLC16A3-204ENST00000578522 535 ntTSL 417.02■□□□□ 0.321e-12■□□□□ 8.3
SND1Q7KZF4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.12e-8■□□□□ 8.3
SND1Q7KZF4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.622e-8■□□□□ 8.3
SND1Q7KZF4 TAF15-210ENST00000604694 891 ntTSL 517.51■□□□□ 0.392e-8■□□□□ 8.3
SND1Q7KZF4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.242e-8■□□□□ 8.3
SND1Q7KZF4 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC15.11■□□□□ 0.015e-7■□□□□ 8.3
SND1Q7KZF4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.04■□□□□ -05e-7■□□□□ 8.3
SND1Q7KZF4 SND1-209ENST00000470723 568 ntTSL 413.12□□□□□ -0.312e-8■□□□□ 8.3
SND1Q7KZF4 ACTN1-201ENST00000193403 3779 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.395e-7■□□□□ 8.3
SND1Q7KZF4 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.535e-7■□□□□ 8.3
SND1Q7KZF4 SND1-211ENST00000484767 460 ntTSL 410.17□□□□□ -0.782e-8■□□□□ 8.3
SND1Q7KZF4 SND1-216ENST00000492840 472 ntTSL 58.47□□□□□ -1.052e-8■□□□□ 8.3
SND1Q7KZF4 SND1-205ENST00000467238 716 ntTSL 37.36□□□□□ -1.232e-8■□□□□ 8.3
SND1Q7KZF4 A2M-204ENST00000467091 533 ntTSL 53.98□□□□□ -1.778e-67■□□□□ 8.3
SND1Q7KZF4 SERINC5-205ENST00000513907 547 ntTSL 47.79□□□□□ -1.162e-7■□□□□ 8.3
SND1Q7KZF4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.613e-7■□□□□ 8.3
SND1Q7KZF4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.573e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.79■□□□□ 0.443e-7■□□□□ 8.3
SND1Q7KZF4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.323e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-208ENST00000554843 655 ntTSL 215.43■□□□□ 0.063e-7■□□□□ 8.3
SND1Q7KZF4 BLMH-205ENST00000578090 1483 ntTSL 214.45□□□□□ -0.13e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.04□□□□□ -0.163e-7■□□□□ 8.3
SND1Q7KZF4 BLMH-204ENST00000577623 823 ntTSL 512.6□□□□□ -0.393e-7■□□□□ 8.3
SND1Q7KZF4 BLMH-209ENST00000580709 561 ntTSL 412.41□□□□□ -0.423e-7■□□□□ 8.3
SND1Q7KZF4 BLMH-213ENST00000584603 1020 ntTSL 512.01□□□□□ -0.493e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-206ENST00000554541 925 ntTSL 211.95□□□□□ -0.53e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-211ENST00000555764 1002 ntTSL 2 BASIC10.68□□□□□ -0.73e-7■□□□□ 8.3
SND1Q7KZF4 BLMH-210ENST00000581037 788 ntTSL 510.55□□□□□ -0.723e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC8.53□□□□□ -1.043e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-203ENST00000553688 787 ntTSL 58.24□□□□□ -1.093e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-207ENST00000554620 790 ntTSL 58.24□□□□□ -1.093e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-209ENST00000554961 814 ntTSL 28.24□□□□□ -1.093e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-210ENST00000555050 309 ntTSL 28.17□□□□□ -1.13e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.243e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.18□□□□□ -1.263e-7■□□□□ 8.3
SND1Q7KZF4 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.18□□□□□ -1.263e-7■□□□□ 8.3
SND1Q7KZF4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.373e-7■□□□□ 8.3
SND1Q7KZF4 ST6GAL1-207ENST00000438590 608 ntTSL 312.31□□□□□ -0.441e-18■□□□□ 8.3
SND1Q7KZF4 ST6GAL1-212ENST00000448408 1005 ntTSL 510.48□□□□□ -0.731e-18■□□□□ 8.3
SND1Q7KZF4 ST6GAL1-210ENST00000446170 588 ntTSL 49.49□□□□□ -0.891e-18■□□□□ 8.3
SND1Q7KZF4 ST6GAL1-203ENST00000417392 707 ntTSL 28.5□□□□□ -1.051e-18■□□□□ 8.3
SND1Q7KZF4 ST6GAL1-202ENST00000416235 577 ntTSL 26.5□□□□□ -1.371e-18■□□□□ 8.3
SND1Q7KZF4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.452e-13■□□□□ 8.3
SND1Q7KZF4 MIF-203ENST00000498385 435 ntTSL 220.97■□□□□ 0.952e-13■□□□□ 8.3
SND1Q7KZF4 MIF-202ENST00000465752 589 ntTSL 1 (best)18.06■□□□□ 0.482e-13■□□□□ 8.3
SND1Q7KZF4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.042e-13■□□□□ 8.3
SND1Q7KZF4 ACP2-208ENST00000529788 570 ntTSL 214.81□□□□□ -0.043e-7■□□□□ 8.3
SND1Q7KZF4 TMEM209-205ENST00000471985 571 ntTSL 46.08□□□□□ -1.442e-8■□□□□ 8.3
Retrieved 100 of 13,567 protein–RNA pairs in 249.5 ms