RNA–Protein interactions for RNA: ENST00000492663.1

MDH2-208, Transcript of malate dehydrogenase 2, humanhuman

TSL 2

Gene MDH2, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH2-208ENST00000492663 NISCHQ9Y2I1 1504 aa17.58■□□□□ 0.41
MDH2-208ENST00000492663 ABCC9O60706 1549 aa15.53■□□□□ 0.08
MDH2-208ENST00000492663 HRCP23327 699 aa15.5■□□□□ 0.07
MDH2-208ENST00000492663 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
MDH2-208ENST00000492663 SUPT5HO00267 1087 aaKnown RBP15.07■□□□□ 0
MDH2-208ENST00000492663 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
MDH2-208ENST00000492663 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
MDH2-208ENST00000492663 CHIC1Q5VXU3 224 aa15.01□□□□□ -0.01
MDH2-208ENST00000492663 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
MDH2-208ENST00000492663 PCGF6Q9BYE7 350 aa14.98□□□□□ -0.01
MDH2-208ENST00000492663 ZEB1P37275 1124 aaPredicted RBP14.97□□□□□ -0.01
MDH2-208ENST00000492663 ZCCHC6Q5VYS8 1495 aaKnown RBP14.96□□□□□ -0.01
MDH2-208ENST00000492663 MYT1Q01538 1121 aa14.96□□□□□ -0.01
MDH2-208ENST00000492663 MYO15BQ96JP2 1530 aa14.88□□□□□ -0.03
MDH2-208ENST00000492663 TRIM26Q12899 539 aaPredicted RBP14.83□□□□□ -0.04
MDH2-208ENST00000492663 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
MDH2-208ENST00000492663 PPARGC1BQ86YN6 1023 aaKnown RBP14.73□□□□□ -0.05
MDH2-208ENST00000492663 RB1CC1Q8TDY2 1594 aa14.58□□□□□ -0.08
MDH2-208ENST00000492663 DCAF8L2P0C7V8 631 aa14.57□□□□□ -0.08
MDH2-208ENST00000492663 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
MDH2-208ENST00000492663 SCAF1Q9H7N4 1312 aaKnown RBP14.43□□□□□ -0.1
MDH2-208ENST00000492663 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
MDH2-208ENST00000492663 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
MDH2-208ENST00000492663 NACADO15069 1562 aa14.38□□□□□ -0.11
MDH2-208ENST00000492663 CENPBP07199 599 aaPredicted RBP14.35□□□□□ -0.11
MDH2-208ENST00000492663 ACIN1Q9UKV3 1341 aaKnown RBP14.32□□□□□ -0.12
MDH2-208ENST00000492663 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
MDH2-208ENST00000492663 TTBK1Q5TCY1 1321 aaPredicted RBP14.07□□□□□ -0.16
MDH2-208ENST00000492663 NEUROD1Q13562 356 aa14.06□□□□□ -0.16
MDH2-208ENST00000492663 GTF3C3Q9Y5Q9 886 aa14.06□□□□□ -0.16
MDH2-208ENST00000492663 DIEXFQ68CQ4 756 aaKnown RBP14.05□□□□□ -0.16
MDH2-208ENST00000492663 CCER1Q8TC90 406 aaPredicted RBP14.04□□□□□ -0.16
MDH2-208ENST00000492663 CECR2Q9BXF3 1484 aa14.04□□□□□ -0.16
MDH2-208ENST00000492663 RSF1Q96T23 1441 aaPredicted RBP14.03□□□□□ -0.16
MDH2-208ENST00000492663 BICRAQ9NZM4 1560 aa14□□□□□ -0.17
MDH2-208ENST00000492663 CLSPNQ9HAW4 1339 aa13.99□□□□□ -0.17
MDH2-208ENST00000492663 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
MDH2-208ENST00000492663 UNC13AQ9UPW8 1703 aa13.9□□□□□ -0.18
MDH2-208ENST00000492663 DNAJC5Q9H3Z4 198 aa13.9□□□□□ -0.18
MDH2-208ENST00000492663 ZNF316A6NFI3 1004 aaPredicted RBP13.89□□□□□ -0.19
MDH2-208ENST00000492663 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
MDH2-208ENST00000492663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.84□□□□□ -0.19
MDH2-208ENST00000492663 FAM9AQ8IZU1 332 aaPredicted RBP13.84□□□□□ -0.19
MDH2-208ENST00000492663 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
MDH2-208ENST00000492663 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
MDH2-208ENST00000492663 EEA1Q15075 1411 aa13.74□□□□□ -0.21
MDH2-208ENST00000492663 TNIKQ9UKE5 1360 aa13.7□□□□□ -0.22
MDH2-208ENST00000492663 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
MDH2-208ENST00000492663 CEP162Q5TB80 1403 aa13.62□□□□□ -0.23
MDH2-208ENST00000492663 MIER1Q8N108 512 aa13.57□□□□□ -0.24
MDH2-208ENST00000492663 MROH2BQ7Z745 1585 aa13.56□□□□□ -0.24
MDH2-208ENST00000492663 YTHDC1Q96MU7 727 aaKnown RBP13.55□□□□□ -0.24
MDH2-208ENST00000492663 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
MDH2-208ENST00000492663 ANP32EQ9BTT0 268 aa13.53□□□□□ -0.24
MDH2-208ENST00000492663 EHMT2Q96KQ7 1210 aa13.52□□□□□ -0.25
MDH2-208ENST00000492663 WIZO95785 1651 aa13.52□□□□□ -0.25
MDH2-208ENST00000492663 GOLGA3Q08378 1498 aa13.51□□□□□ -0.25
MDH2-208ENST00000492663 CUX2O14529 1486 aa13.5□□□□□ -0.25
MDH2-208ENST00000492663 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
MDH2-208ENST00000492663 TOP2AP11388 1531 aaKnown RBP13.48□□□□□ -0.25
MDH2-208ENST00000492663 SUPT16HQ9Y5B9 1047 aaKnown RBP13.44□□□□□ -0.26
MDH2-208ENST00000492663 APLP2Q06481 763 aa13.43□□□□□ -0.26
MDH2-208ENST00000492663 UBTFP17480 764 aaKnown RBP13.42□□□□□ -0.26
MDH2-208ENST00000492663 KIF21BO75037 1637 aa13.4□□□□□ -0.26
MDH2-208ENST00000492663 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
MDH2-208ENST00000492663 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
MDH2-208ENST00000492663 BAZ1BQ9UIG0 1483 aaKnown RBP13.38□□□□□ -0.27
MDH2-208ENST00000492663 TSHZ2Q9NRE2 1034 aa13.36□□□□□ -0.27
MDH2-208ENST00000492663 VPS8Q8N3P4 1428 aa13.35□□□□□ -0.27
MDH2-208ENST00000492663 SMARCA2P51531 1590 aa13.33□□□□□ -0.28
MDH2-208ENST00000492663 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
MDH2-208ENST00000492663 SOGA1O94964 1423 aa13.32□□□□□ -0.28
MDH2-208ENST00000492663 BCL11AQ9H165 835 aa13.32□□□□□ -0.28
MDH2-208ENST00000492663 HNRNPUL2Q1KMD3 747 aaKnown RBP13.31□□□□□ -0.28
MDH2-208ENST00000492663 MYT1LQ9UL68 1186 aa13.31□□□□□ -0.28
MDH2-208ENST00000492663 CLIP1P30622 1438 aa13.3□□□□□ -0.28
MDH2-208ENST00000492663 NCAPD3P42695 1498 aa13.3□□□□□ -0.28
MDH2-208ENST00000492663 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
MDH2-208ENST00000492663 NEFLP07196 543 aa13.26□□□□□ -0.29
MDH2-208ENST00000492663 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
MDH2-208ENST00000492663 DHX57Q6P158 1386 aaKnown RBP13.22□□□□□ -0.29
MDH2-208ENST00000492663 NESP48681 1621 aa13.17□□□□□ -0.3
MDH2-208ENST00000492663 TIMELESSQ9UNS1 1208 aa13.16□□□□□ -0.3
MDH2-208ENST00000492663 RUSC2Q8N2Y8 1516 aa13.16□□□□□ -0.3
MDH2-208ENST00000492663 CCER2I3L3R5 266 aa13.13□□□□□ -0.31
MDH2-208ENST00000492663 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
MDH2-208ENST00000492663 ERICH3Q5RHP9 1530 aa13.13□□□□□ -0.31
MDH2-208ENST00000492663 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
MDH2-208ENST00000492663 ERICH6BQ5W0A0 696 aa13.11□□□□□ -0.31
MDH2-208ENST00000492663 PDS5BQ9NTI5 1447 aa13.11□□□□□ -0.31
MDH2-208ENST00000492663 FKBP8Q14318 412 aa13.09□□□□□ -0.31
MDH2-208ENST00000492663 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
MDH2-208ENST00000492663 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
MDH2-208ENST00000492663 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
MDH2-208ENST00000492663 ERICH6Q7L0X2 663 aa13.06□□□□□ -0.32
MDH2-208ENST00000492663 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
MDH2-208ENST00000492663 LAMC3Q9Y6N6 1575 aa13.02□□□□□ -0.33
MDH2-208ENST00000492663 CDK11AQ9UQ88 783 aaPredicted RBP13.01□□□□□ -0.33
MDH2-208ENST00000492663 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
MDH2-208ENST00000492663 RAPGEF2Q9Y4G8 1499 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms