RNA–Protein interactions for RNA: ENST00000519469.1

RAD21-205, Transcript of RAD21 cohesin complex component, humanhuman

TSL 2

Gene RAD21, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD21-205ENST00000519469 AEBP2Q6ZN18 517 aaPredicted RBP35.93■■■■□ 3.34
RAD21-205ENST00000519469 CHIC1Q5VXU3 224 aa34.38■■■■□ 3.09
RAD21-205ENST00000519469 SENP3Q9H4L4 574 aaPredicted RBP30.63■■■□□ 2.49
RAD21-205ENST00000519469 PHF23Q9BUL5 403 aaPredicted RBP30.27■■■□□ 2.44
RAD21-205ENST00000519469 FOXD1Q16676 465 aa28.51■■■□□ 2.15
RAD21-205ENST00000519469 PLPPR3Q6T4P5 718 aa27.62■■■□□ 2.01
RAD21-205ENST00000519469 PPP6R1Q9UPN7 881 aa26.86■■□□□ 1.89
RAD21-205ENST00000519469 ADRA2BP18089 450 aa26.83■■□□□ 1.89
RAD21-205ENST00000519469 PIAS4Q8N2W9 510 aaPredicted RBP26.76■■□□□ 1.87
RAD21-205ENST00000519469 MSH5O43196 834 aa26.59■■□□□ 1.85
RAD21-205ENST00000519469 POTEDQ86YR6 584 aa25.5■■□□□ 1.67
RAD21-205ENST00000519469 MAPK8IP2Q13387 824 aaPredicted RBP24.56■■□□□ 1.52
RAD21-205ENST00000519469 SCAF1Q9H7N4 1312 aaKnown RBP24.55■■□□□ 1.52
RAD21-205ENST00000519469 DMRT2Q9Y5R5 561 aa24.31■■□□□ 1.48
RAD21-205ENST00000519469 PPP4R3CPQ6ZMV5 832 aa24.25■■□□□ 1.47
RAD21-205ENST00000519469 CNKSR2Q8WXI2 1034 aa23.72■■□□□ 1.39
RAD21-205ENST00000519469 HOXD11P31277 338 aaPredicted RBP23.5■■□□□ 1.35
RAD21-205ENST00000519469 DCAF8L1A6NGE4 600 aa23.45■■□□□ 1.34
RAD21-205ENST00000519469 NCBP3Q53F19 620 aaKnown RBP23.42■■□□□ 1.34
RAD21-205ENST00000519469 RNF216Q9NWF9 866 aaPredicted RBP23.42■■□□□ 1.34
RAD21-205ENST00000519469 NPM3O75607 178 aaKnown RBP23.05■■□□□ 1.28
RAD21-205ENST00000519469 KCNA4P22459 653 aa22.87■■□□□ 1.25
RAD21-205ENST00000519469 CACNB1Q02641 598 aaPredicted RBP22.71■■□□□ 1.23
RAD21-205ENST00000519469 RNF39Q9H2S5 420 aa22.69■■□□□ 1.22
RAD21-205ENST00000519469 DNAJC5BQ9UF47 199 aa22.58■■□□□ 1.21
RAD21-205ENST00000519469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.51■■□□□ 1.191e-9■□□□□ 10.1
RAD21-205ENST00000519469 C1QBPQ07021 282 aaKnown RBP22.38■■□□□ 1.17
RAD21-205ENST00000519469 U3KPZ7 1027 aaPredicted RBP22■■□□□ 1.11
RAD21-205ENST00000519469 SLC4A2P04920 1241 aa21.93■■□□□ 1.1
RAD21-205ENST00000519469 SLC4A1APQ9BWU0 796 aaKnown RBP21.68■■□□□ 1.06
RAD21-205ENST00000519469 CAPN15O75808 1086 aa21.63■■□□□ 1.05
RAD21-205ENST00000519469 SPINK5Q9NQ38 1064 aaPredicted RBP21.62■■□□□ 1.05
RAD21-205ENST00000519469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.48■■□□□ 1.03
RAD21-205ENST00000519469 HNRNPUL2Q1KMD3 747 aaKnown RBP21.48■■□□□ 1.03
RAD21-205ENST00000519469 APLP2Q06481 763 aa21.45■■□□□ 1.02
RAD21-205ENST00000519469 SAMD1Q6SPF0 538 aaPredicted RBP21.38■■□□□ 1.01
RAD21-205ENST00000519469 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
RAD21-205ENST00000519469 DSG3P32926 999 aa21.35■■□□□ 1.01
RAD21-205ENST00000519469 MYCNP04198 464 aaPredicted RBP21.33■■□□□ 1.01
RAD21-205ENST00000519469 FOXD4L1Q9NU39 408 aa21.27■■□□□ 1
RAD21-205ENST00000519469 ZNF219Q9P2Y4 722 aaPredicted RBP21.27■■□□□ 1
RAD21-205ENST00000519469 ABCB7O75027 752 aa21.16■□□□□ 0.98
RAD21-205ENST00000519469 ZBTB22O15209 634 aa21.01■□□□□ 0.95
RAD21-205ENST00000519469 ATF5Q9Y2D1 282 aaPredicted RBP20.81■□□□□ 0.92
RAD21-205ENST00000519469 POLA2Q14181 598 aa20.79■□□□□ 0.92
RAD21-205ENST00000519469 ATXN8OSP0DMR3 200 aa20.54■□□□□ 0.88
RAD21-205ENST00000519469 RBM42Q9BTD8 480 aaKnown RBP20.4■□□□□ 0.86
RAD21-205ENST00000519469 ZBTB12Q9Y330 459 aaPredicted RBP20.38■□□□□ 0.85
RAD21-205ENST00000519469 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
RAD21-205ENST00000519469 EHMT2Q96KQ7 1210 aa20.28■□□□□ 0.84
RAD21-205ENST00000519469 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
RAD21-205ENST00000519469 POTEHQ6S545 545 aa20.05■□□□□ 0.8
RAD21-205ENST00000519469 FBLN2P98095 1184 aa20.03■□□□□ 0.8
RAD21-205ENST00000519469 AKT1S1Q96B36 256 aa19.96■□□□□ 0.79
RAD21-205ENST00000519469 MKRN4PQ13434 485 aaPredicted RBP19.85■□□□□ 0.77
RAD21-205ENST00000519469 CHRDL2Q6WN34 429 aa19.85■□□□□ 0.77
RAD21-205ENST00000519469 REM2Q8IYK8 340 aaPredicted RBP19.79■□□□□ 0.76
RAD21-205ENST00000519469 SPDYE2BA6NHP3 402 aa19.76■□□□□ 0.75
RAD21-205ENST00000519469 SPDYE6P0CI01 402 aa19.76■□□□□ 0.75
RAD21-205ENST00000519469 SPDYE2Q495Y8 402 aa19.76■□□□□ 0.75
RAD21-205ENST00000519469 ZNF692Q9BU19 519 aaPredicted RBP19.61■□□□□ 0.73
RAD21-205ENST00000519469 PITPNM1O00562 1244 aa19.58■□□□□ 0.72
RAD21-205ENST00000519469 SSUH2Q9Y2M2 353 aa19.5■□□□□ 0.71
RAD21-205ENST00000519469 PIP4P2Q8N4L2 257 aa19.42■□□□□ 0.7
RAD21-205ENST00000519469 CLEC11AQ9Y240 323 aa19.39■□□□□ 0.69
RAD21-205ENST00000519469 SPDYE1Q8NFV5 336 aaPredicted RBP19.38■□□□□ 0.69
RAD21-205ENST00000519469 FXR2P51116 673 aaKnown RBP eCLIP19.32■□□□□ 0.684e-6■□□□□ 9.7
RAD21-205ENST00000519469 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
RAD21-205ENST00000519469 SPDYE4A6NLX3 237 aa19.1■□□□□ 0.65
RAD21-205ENST00000519469 PRKAR2AP13861 404 aaKnown RBP19.1■□□□□ 0.65
RAD21-205ENST00000519469 PRR29P0C7W0 189 aa19.07■□□□□ 0.64
RAD21-205ENST00000519469 HAX1O00165 279 aa19.05■□□□□ 0.64
RAD21-205ENST00000519469 CHADLQ6NUI6 762 aa18.97■□□□□ 0.63
RAD21-205ENST00000519469 SP7Q8TDD2 431 aaPredicted RBP18.92■□□□□ 0.62
RAD21-205ENST00000519469 STAG3Q9UJ98 1225 aa18.83■□□□□ 0.6
RAD21-205ENST00000519469 EVX2Q03828 476 aa18.77■□□□□ 0.6
RAD21-205ENST00000519469 C19orf67A6NJJ6 358 aa18.69■□□□□ 0.58
RAD21-205ENST00000519469 FARP1Q9Y4F1 1045 aaPredicted RBP18.67■□□□□ 0.58
RAD21-205ENST00000519469 CREBZFQ9NS37 354 aa18.61■□□□□ 0.57
RAD21-205ENST00000519469 PROM2Q8N271 834 aa18.58■□□□□ 0.56
RAD21-205ENST00000519469 CD44P16070 742 aaKnown RBP18.52■□□□□ 0.56
RAD21-205ENST00000519469 FKBP8Q14318 412 aa18.45■□□□□ 0.54
RAD21-205ENST00000519469 GABBR2O75899 941 aa18.38■□□□□ 0.53
RAD21-205ENST00000519469 NPM1P06748 294 aaKnown RBP eCLIP18.32■□□□□ 0.52
RAD21-205ENST00000519469 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
RAD21-205ENST00000519469 MNX1P50219 401 aaPredicted RBP18.28■□□□□ 0.52
RAD21-205ENST00000519469 PAK3O75914 559 aaPredicted RBP18.24■□□□□ 0.51
RAD21-205ENST00000519469 MIER1Q8N108 512 aa18.23■□□□□ 0.51
RAD21-205ENST00000519469 PLEKHG5O94827 1062 aa18.2■□□□□ 0.5
RAD21-205ENST00000519469 ZNF579Q8NAF0 562 aaKnown RBP18.2■□□□□ 0.5
RAD21-205ENST00000519469 CLCN6P51797 869 aa18.13■□□□□ 0.49
RAD21-205ENST00000519469 PLCD3Q8N3E9 789 aa18.13■□□□□ 0.49
RAD21-205ENST00000519469 PHF12Q96QT6 1004 aa18.08■□□□□ 0.48
RAD21-205ENST00000519469 TSPYL2Q9H2G4 693 aaPredicted RBP18.03■□□□□ 0.48
RAD21-205ENST00000519469 DCBLD2Q96PD2 775 aa17.99■□□□□ 0.47
RAD21-205ENST00000519469 GALR2O43603 387 aaPredicted RBP17.98■□□□□ 0.47
RAD21-205ENST00000519469 POTEIP0CG38 1075 aa17.96■□□□□ 0.47
RAD21-205ENST00000519469 FBXO3Q9UK99 471 aa17.96■□□□□ 0.47
RAD21-205ENST00000519469 ZBTB47Q9UFB7 747 aaPredicted RBP17.93■□□□□ 0.46
RAD21-205ENST00000519469 RASEFQ8IZ41 740 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms