Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSF1P09603 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.35■□□□□ 0.05
CSF1P09603 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSF1P09603 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
CSF1P09603 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CSF1P09603 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSF1P09603 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.35■□□□□ 0.05
CSF1P09603 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSF1P09603 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CSF1P09603 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.34■□□□□ 0.05
CSF1P09603 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.34■□□□□ 0.05
CSF1P09603 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
CSF1P09603 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.34■□□□□ 0.05
CSF1P09603 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.34■□□□□ 0.05
CSF1P09603 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.34■□□□□ 0.05
CSF1P09603 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.34■□□□□ 0.05
CSF1P09603 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.34■□□□□ 0.05
CSF1P09603 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.34■□□□□ 0.05
CSF1P09603 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.34■□□□□ 0.05
CSF1P09603 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.34■□□□□ 0.05
CSF1P09603 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.34■□□□□ 0.05
CSF1P09603 AL445675.2-201ENST00000620291 557 ntBASIC15.34■□□□□ 0.05
CSF1P09603 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.34■□□□□ 0.05
CSF1P09603 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CSF1P09603 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.34■□□□□ 0.05
CSF1P09603 NFIC-211ENST00000641145 8399 ntBASIC15.34■□□□□ 0.05
CSF1P09603 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
CSF1P09603 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSF1P09603 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CSF1P09603 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSF1P09603 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSF1P09603 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CSF1P09603 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSF1P09603 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.33■□□□□ 0.04
CSF1P09603 PCDHB19P-201ENST00000570871 2371 ntBASIC15.33■□□□□ 0.04
CSF1P09603 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
CSF1P09603 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.33■□□□□ 0.04
CSF1P09603 NIFKP9-201ENST00000419265 221 ntBASIC15.33■□□□□ 0.04
CSF1P09603 AL390955.1-201ENST00000428694 934 ntBASIC15.33■□□□□ 0.04
CSF1P09603 LIN28AP1-201ENST00000429574 405 ntBASIC15.33■□□□□ 0.04
CSF1P09603 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.33■□□□□ 0.04
CSF1P09603 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.33■□□□□ 0.04
CSF1P09603 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
CSF1P09603 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.33■□□□□ 0.04
CSF1P09603 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.33■□□□□ 0.04
CSF1P09603 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.33■□□□□ 0.04
CSF1P09603 FITM1-202ENST00000559294 800 ntBASIC15.33■□□□□ 0.04
CSF1P09603 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.33■□□□□ 0.04
CSF1P09603 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CSF1P09603 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.33■□□□□ 0.04
CSF1P09603 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.33■□□□□ 0.04
CSF1P09603 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.33■□□□□ 0.04
CSF1P09603 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.33■□□□□ 0.04
CSF1P09603 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
CSF1P09603 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSF1P09603 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CSF1P09603 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSF1P09603 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSF1P09603 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.32■□□□□ 0.04
CSF1P09603 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSF1P09603 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CSF1P09603 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CSF1P09603 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.32■□□□□ 0.04
CSF1P09603 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.32■□□□□ 0.04
CSF1P09603 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSF1P09603 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSF1P09603 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSF1P09603 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSF1P09603 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms