Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.36■□□□□ 0.05
DHFRP00374 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.36■□□□□ 0.05
DHFRP00374 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
DHFRP00374 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
DHFRP00374 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.36■□□□□ 0.05
DHFRP00374 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.36■□□□□ 0.05
DHFRP00374 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.36■□□□□ 0.05
DHFRP00374 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.36■□□□□ 0.05
DHFRP00374 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.36■□□□□ 0.05
DHFRP00374 UNC93B4-201ENST00000505679 747 ntBASIC15.36■□□□□ 0.05
DHFRP00374 KRT18P41-201ENST00000518924 1277 ntBASIC15.36■□□□□ 0.05
DHFRP00374 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.36■□□□□ 0.05
DHFRP00374 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.36■□□□□ 0.05
DHFRP00374 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.36■□□□□ 0.05
DHFRP00374 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
DHFRP00374 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.36■□□□□ 0.05
DHFRP00374 HTR7P1-201ENST00000538670 1336 ntBASIC15.36■□□□□ 0.05
DHFRP00374 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
DHFRP00374 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
DHFRP00374 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
DHFRP00374 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DHFRP00374 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.35■□□□□ 0.05
DHFRP00374 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.35■□□□□ 0.05
DHFRP00374 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.35■□□□□ 0.05
DHFRP00374 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.35■□□□□ 0.05
DHFRP00374 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.35■□□□□ 0.05
DHFRP00374 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
DHFRP00374 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
DHFRP00374 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
DHFRP00374 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.35■□□□□ 0.05
DHFRP00374 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
DHFRP00374 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
DHFRP00374 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.35■□□□□ 0.05
DHFRP00374 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.35■□□□□ 0.05
DHFRP00374 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.35■□□□□ 0.05
DHFRP00374 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DHFRP00374 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 KRT8P3-201ENST00000519669 1449 ntBASIC15.34■□□□□ 0.05
DHFRP00374 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
DHFRP00374 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
DHFRP00374 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
DHFRP00374 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.34■□□□□ 0.05
DHFRP00374 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.34■□□□□ 0.05
DHFRP00374 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.34■□□□□ 0.05
DHFRP00374 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.34■□□□□ 0.05
DHFRP00374 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DHFRP00374 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms