Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.56■□□□□ 0.4
PCDHGA12O60330 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 RNA5SP415-201ENST00000517246 115 ntBASIC17.55■□□□□ 0.4
PCDHGA12O60330 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA12O60330 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA12O60330 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 KRT18P3-201ENST00000451602 1288 ntBASIC17.54■□□□□ 0.4
PCDHGA12O60330 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 AC012640.2-201ENST00000561606 901 ntBASIC17.54■□□□□ 0.4
PCDHGA12O60330 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 AC107918.4-202ENST00000641623 219 ntBASIC17.54■□□□□ 0.4
PCDHGA12O60330 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 BCL2-203ENST00000589955 5011 ntBASIC17.54■□□□□ 0.4
PCDHGA12O60330 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA12O60330 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA12O60330 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA12O60330 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGA12O60330 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms