Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.11■□□□□ 0.01
SSNA1O43805 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.11■□□□□ 0.01
SSNA1O43805 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.11■□□□□ 0.01
SSNA1O43805 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.11■□□□□ 0.01
SSNA1O43805 KRT18P11-201ENST00000435214 1283 ntBASIC15.11■□□□□ 0.01
SSNA1O43805 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.11■□□□□ 0.01
SSNA1O43805 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.11■□□□□ 0.01
SSNA1O43805 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.11■□□□□ 0.01
SSNA1O43805 AC110285.6-201ENST00000617652 491 ntBASIC15.11■□□□□ 0.01
SSNA1O43805 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SSNA1O43805 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 AC006449.5-201ENST00000610658 2098 ntBASIC15.11■□□□□ 0.01
SSNA1O43805 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SSNA1O43805 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.11■□□□□ 0.01
SSNA1O43805 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SSNA1O43805 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.11■□□□□ 0.01
SSNA1O43805 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SSNA1O43805 KRT8P41-201ENST00000533985 1514 ntBASIC15.11■□□□□ 0.01
SSNA1O43805 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
SSNA1O43805 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.11■□□□□ 0.01
SSNA1O43805 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.11■□□□□ 0.01
SSNA1O43805 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSNA1O43805 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 AC005052.1-201ENST00000625181 2492 ntBASIC15.1■□□□□ 0.01
SSNA1O43805 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 HLA-J-201ENST00000462773 1622 ntBASIC15.1■□□□□ 0.01
SSNA1O43805 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 AC099343.3-201ENST00000605834 2503 ntBASIC15.1■□□□□ 0.01
SSNA1O43805 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 AL161772.1-201ENST00000610494 4412 ntBASIC15.1■□□□□ 0.01
SSNA1O43805 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SSNA1O43805 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.1■□□□□ 0.01
SSNA1O43805 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.1■□□□□ 0.01
SSNA1O43805 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.1■□□□□ 0.01
SSNA1O43805 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.1■□□□□ 0.01
SSNA1O43805 OR10C1-204ENST00000622521 1039 ntBASIC15.1■□□□□ 0.01
SSNA1O43805 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.1■□□□□ 0.01
SSNA1O43805 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.1■□□□□ 0.01
SSNA1O43805 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSNA1O43805 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.1■□□□□ 0.01
SSNA1O43805 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.09■□□□□ 0.01
SSNA1O43805 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.09■□□□□ 0.01
SSNA1O43805 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.09■□□□□ 0.01
SSNA1O43805 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 AC005915.1-201ENST00000624912 2018 ntBASIC15.09■□□□□ 0.01
SSNA1O43805 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.09■□□□□ 0.01
SSNA1O43805 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SSNA1O43805 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.09■□□□□ 0.01
SSNA1O43805 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms