Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EIF3FO00303 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.32■□□□□ 0.36
EIF3FO00303 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EIF3FO00303 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.32■□□□□ 0.36
EIF3FO00303 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.32■□□□□ 0.36
EIF3FO00303 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EIF3FO00303 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EIF3FO00303 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EIF3FO00303 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.32■□□□□ 0.36
EIF3FO00303 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EIF3FO00303 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EIF3FO00303 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.32■□□□□ 0.36
EIF3FO00303 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.31■□□□□ 0.36
EIF3FO00303 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.31■□□□□ 0.36
EIF3FO00303 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
EIF3FO00303 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
EIF3FO00303 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.31■□□□□ 0.36
EIF3FO00303 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EIF3FO00303 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
EIF3FO00303 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
EIF3FO00303 AC046158.3-201ENST00000624947 2558 ntBASIC17.31■□□□□ 0.36
EIF3FO00303 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EIF3FO00303 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.31■□□□□ 0.36
EIF3FO00303 FAM220CP-201ENST00000395253 831 ntBASIC17.31■□□□□ 0.36
EIF3FO00303 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
EIF3FO00303 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
EIF3FO00303 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.31■□□□□ 0.36
EIF3FO00303 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.31■□□□□ 0.36
EIF3FO00303 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.31■□□□□ 0.36
EIF3FO00303 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.31■□□□□ 0.36
EIF3FO00303 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.31■□□□□ 0.36
EIF3FO00303 Z69720.1-201ENST00000601483 472 ntBASIC17.31■□□□□ 0.36
EIF3FO00303 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.31■□□□□ 0.36
EIF3FO00303 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.31■□□□□ 0.36
EIF3FO00303 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.31■□□□□ 0.36
EIF3FO00303 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.31■□□□□ 0.36
EIF3FO00303 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EIF3FO00303 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
EIF3FO00303 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
EIF3FO00303 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.31■□□□□ 0.36
EIF3FO00303 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.31■□□□□ 0.36
EIF3FO00303 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.31■□□□□ 0.36
EIF3FO00303 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.31■□□□□ 0.36
EIF3FO00303 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
EIF3FO00303 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EIF3FO00303 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
EIF3FO00303 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
EIF3FO00303 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.3■□□□□ 0.36
EIF3FO00303 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
EIF3FO00303 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
EIF3FO00303 KRT18P1-202ENST00000452408 1331 ntBASIC17.3■□□□□ 0.36
EIF3FO00303 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.3■□□□□ 0.36
EIF3FO00303 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.3■□□□□ 0.36
EIF3FO00303 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.3■□□□□ 0.36
EIF3FO00303 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.3■□□□□ 0.36
EIF3FO00303 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.3■□□□□ 0.36
EIF3FO00303 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.3■□□□□ 0.36
EIF3FO00303 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.3■□□□□ 0.36
EIF3FO00303 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.3■□□□□ 0.36
EIF3FO00303 TPSP2-201ENST00000561760 610 ntBASIC17.3■□□□□ 0.36
EIF3FO00303 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.3■□□□□ 0.36
EIF3FO00303 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.3■□□□□ 0.36
EIF3FO00303 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.3■□□□□ 0.36
EIF3FO00303 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.3■□□□□ 0.36
EIF3FO00303 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.3■□□□□ 0.36
EIF3FO00303 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EIF3FO00303 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms