Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CHKB-CPT1BH3BT56 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 MBP-202ENST00000355994 2772 ntTSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 REXO1L9P-201ENST00000604264 2108 ntBASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 BANP-203ENST00000393207 2438 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 PGM5P4-201ENST00000421970 445 ntBASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 BX664725.1-201ENST00000438252 379 ntBASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 AC120498.10-201ENST00000621827 505 ntBASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 BANP-204ENST00000393208 2283 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 PAUPAR-201ENST00000630360 2965 ntBASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 TP73-203ENST00000357733 4899 ntTSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 AC007614.5-201ENST00000623424 8892 ntBASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 RNF126P1-201ENST00000567452 1320 ntBASIC9.82□□□□□ -0.84
CHKB-CPT1BH3BT56 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms