Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.58□□□□□ -0.24
COLCA2A8K830 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
COLCA2A8K830 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.58□□□□□ -0.24
COLCA2A8K830 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.58□□□□□ -0.24
COLCA2A8K830 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
COLCA2A8K830 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.58□□□□□ -0.24
COLCA2A8K830 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.58□□□□□ -0.24
COLCA2A8K830 AP001160.3-201ENST00000601484 763 ntBASIC13.58□□□□□ -0.24
COLCA2A8K830 LINC01451-201ENST00000623792 534 ntBASIC13.58□□□□□ -0.24
COLCA2A8K830 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
COLCA2A8K830 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
COLCA2A8K830 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.58□□□□□ -0.24
COLCA2A8K830 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
COLCA2A8K830 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.58□□□□□ -0.24
COLCA2A8K830 HTR7P1-201ENST00000538670 1336 ntBASIC13.58□□□□□ -0.24
COLCA2A8K830 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
COLCA2A8K830 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
COLCA2A8K830 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 MTHFR-217ENST00000641820 1569 ntBASIC13.58□□□□□ -0.24
COLCA2A8K830 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COLCA2A8K830 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.57□□□□□ -0.24
COLCA2A8K830 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.57□□□□□ -0.24
COLCA2A8K830 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
COLCA2A8K830 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.57□□□□□ -0.24
COLCA2A8K830 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
COLCA2A8K830 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
COLCA2A8K830 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
COLCA2A8K830 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
COLCA2A8K830 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.57□□□□□ -0.24
COLCA2A8K830 SF1-220ENST00000626028 704 ntTSL 2 BASIC13.57□□□□□ -0.24
COLCA2A8K830 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
COLCA2A8K830 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.57□□□□□ -0.24
COLCA2A8K830 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
COLCA2A8K830 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.57□□□□□ -0.24
COLCA2A8K830 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.57□□□□□ -0.24
COLCA2A8K830 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
COLCA2A8K830 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
COLCA2A8K830 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.57□□□□□ -0.24
COLCA2A8K830 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COLCA2A8K830 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
COLCA2A8K830 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.56□□□□□ -0.24
COLCA2A8K830 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
COLCA2A8K830 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
COLCA2A8K830 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
COLCA2A8K830 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.56□□□□□ -0.24
COLCA2A8K830 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
COLCA2A8K830 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC13.56□□□□□ -0.24
COLCA2A8K830 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms