Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 SLC25A1P4-201ENST00000567977 778 ntBASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 RN7SL471P-201ENST00000580476 299 ntBASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 AF186192.3-201ENST00000583427 947 ntBASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 DGCR10-201ENST00000609839 495 ntBASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRDV1A0A1B0GX56 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRDV1A0A1B0GX56 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRDV1A0A1B0GX56 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
TRDV1A0A1B0GX56 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRDV1A0A1B0GX56 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRDV1A0A1B0GX56 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.58■□□□□ 0.09
TRDV1A0A1B0GX56 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRDV1A0A1B0GX56 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRDV1A0A1B0GX56 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.58■□□□□ 0.09
TRDV1A0A1B0GX56 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRDV1A0A1B0GX56 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 AC112497.1-201ENST00000624824 639 ntBASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRDV1A0A1B0GX56 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRDV1A0A1B0GX56 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms