Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 FLJ13224-201ENST00000313737 1514 ntBASIC18.44■□□□□ 0.54
YIPF1Q9Y548 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 AC002558.1-201ENST00000488906 803 ntBASIC18.44■□□□□ 0.54
YIPF1Q9Y548 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
YIPF1Q9Y548 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.43■□□□□ 0.54
YIPF1Q9Y548 AC040169.1-201ENST00000565382 521 ntBASIC18.43■□□□□ 0.54
YIPF1Q9Y548 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 KRT18P55-202ENST00000578578 1546 ntBASIC18.43■□□□□ 0.54
YIPF1Q9Y548 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
YIPF1Q9Y548 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 AC009336.1-201ENST00000608941 1553 ntBASIC18.42■□□□□ 0.54
YIPF1Q9Y548 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 AC064836.3-201ENST00000607928 673 ntBASIC18.42■□□□□ 0.54
YIPF1Q9Y548 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
YIPF1Q9Y548 AC104581.1-202ENST00000635932 2618 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms