Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CXXC1Q9P0U4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CXXC1Q9P0U4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CXXC1Q9P0U4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CXXC1Q9P0U4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CXXC1Q9P0U4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 MIR661-201ENST00000384842 89 ntBASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 TIMM8BP1-201ENST00000452384 211 ntBASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CXXC1Q9P0U4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXXC1Q9P0U4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 AC002472.2-201ENST00000442739 958 ntBASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 FAM185BP-201ENST00000443595 716 ntBASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 AC067863.1-201ENST00000494933 530 ntBASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 RN7SL204P-201ENST00000582831 262 ntBASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CXXC1Q9P0U4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AC100803.2-201ENST00000562459 1963 ntBASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms