Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 AC011467.2-201ENST00000598425 242 ntBASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 AL591684.3-201ENST00000605187 298 ntBASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 IFNL4P1-201ENST00000607083 540 ntBASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP13A1Q9HD20 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP13A1Q9HD20 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 FAM220CP-201ENST00000395253 831 ntBASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 UNC93B7-201ENST00000509439 705 ntBASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 AL691432.3-201ENST00000621860 400 ntBASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 INTS4P1-201ENST00000438455 1935 ntBASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP13A1Q9HD20 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
ATP13A1Q9HD20 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATP13A1Q9HD20 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.14■□□□□ 0.5
ATP13A1Q9HD20 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
ATP13A1Q9HD20 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.14■□□□□ 0.5
ATP13A1Q9HD20 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 AC134043.2-201ENST00000624206 2238 ntBASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 DDX43P3-201ENST00000441064 443 ntBASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.14■□□□□ 0.49
ATP13A1Q9HD20 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms