Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 KRT18P28-201ENST00000453838 1332 ntBASIC13.73□□□□□ -0.21
LINC01006Q8NI28 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 ALG1L5P-201ENST00000482043 771 ntBASIC13.73□□□□□ -0.21
LINC01006Q8NI28 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01006Q8NI28 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 AC100803.2-201ENST00000562459 1963 ntBASIC13.72□□□□□ -0.21
LINC01006Q8NI28 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 AC009949.1-201ENST00000623048 1830 ntBASIC13.72□□□□□ -0.21
LINC01006Q8NI28 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 AC254562.1-201ENST00000417586 456 ntBASIC13.72□□□□□ -0.21
LINC01006Q8NI28 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 DDX43P3-201ENST00000441064 443 ntBASIC13.72□□□□□ -0.21
LINC01006Q8NI28 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 AL513190.1-201ENST00000621254 727 ntBASIC13.72□□□□□ -0.21
LINC01006Q8NI28 AL805961.1-202ENST00000641562 540 ntBASIC13.72□□□□□ -0.21
LINC01006Q8NI28 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 AC097637.2-201ENST00000624096 1997 ntBASIC13.72□□□□□ -0.21
LINC01006Q8NI28 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LINC01006Q8NI28 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 MRPL20P1-201ENST00000400819 433 ntBASIC13.71□□□□□ -0.21
LINC01006Q8NI28 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.71□□□□□ -0.21
LINC01006Q8NI28 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 HTR5BP-201ENST00000430851 1154 ntBASIC13.71□□□□□ -0.21
LINC01006Q8NI28 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 MKNK2P1-201ENST00000437526 628 ntBASIC13.71□□□□□ -0.21
LINC01006Q8NI28 METTL21AP1-201ENST00000438852 635 ntBASIC13.71□□□□□ -0.21
LINC01006Q8NI28 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms