Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 SCARNA2-201ENST00000458748 420 ntBASIC19.05■□□□□ 0.64
BEST2Q8NFU1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 SIRPAP1-201ENST00000448467 1770 ntBASIC19.05■□□□□ 0.64
BEST2Q8NFU1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
BEST2Q8NFU1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 AD001527.2-201ENST00000622994 785 ntBASIC19.04■□□□□ 0.64
BEST2Q8NFU1 TP73-AS1-207ENST00000624167 988 ntBASIC19.04■□□□□ 0.64
BEST2Q8NFU1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.04■□□□□ 0.64
BEST2Q8NFU1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 AL390961.4-201ENST00000623958 2535 ntBASIC19.03■□□□□ 0.64
BEST2Q8NFU1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.03■□□□□ 0.64
BEST2Q8NFU1 FAM197Y8-203ENST00000450145 560 ntBASIC19.03■□□□□ 0.64
BEST2Q8NFU1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST2Q8NFU1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 HLA-A-201ENST00000376802 1334 ntBASIC19.02■□□□□ 0.64
BEST2Q8NFU1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 PMPCAP1-201ENST00000508114 1576 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms