Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CD28P10747 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CD28P10747 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.87□□□□□ -0.19
CD28P10747 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD28P10747 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
CD28P10747 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CD28P10747 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.86□□□□□ -0.19
CD28P10747 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CD28P10747 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 OR7E14P-202ENST00000530490 1290 ntBASIC13.86□□□□□ -0.19
CD28P10747 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 NKAPP1-205ENST00000585790 367 ntBASIC13.86□□□□□ -0.19
CD28P10747 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.86□□□□□ -0.19
CD28P10747 AC117500.6-201ENST00000624871 588 ntBASIC13.86□□□□□ -0.19
CD28P10747 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.86□□□□□ -0.19
CD28P10747 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CD28P10747 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CD28P10747 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
CD28P10747 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD28P10747 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD28P10747 ZNF259P1-201ENST00000407656 1365 ntBASIC13.85□□□□□ -0.19
CD28P10747 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.85□□□□□ -0.19
CD28P10747 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.85□□□□□ -0.19
CD28P10747 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CD28P10747 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.85□□□□□ -0.19
CD28P10747 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.85□□□□□ -0.19
CD28P10747 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.85□□□□□ -0.19
CD28P10747 AC092910.1-201ENST00000482027 1129 ntBASIC13.85□□□□□ -0.19
CD28P10747 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.85□□□□□ -0.19
CD28P10747 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.85□□□□□ -0.19
CD28P10747 TERC-201ENST00000602385 541 ntBASIC13.85□□□□□ -0.19
CD28P10747 AL139288.1-201ENST00000623748 933 ntBASIC13.85□□□□□ -0.19
CD28P10747 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CD28P10747 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
CD28P10747 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.85□□□□□ -0.19
CD28P10747 PHGDH-209ENST00000641074 1780 ntBASIC13.85□□□□□ -0.19
CD28P10747 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD28P10747 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD28P10747 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.85□□□□□ -0.19
CD28P10747 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CD28P10747 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CD28P10747 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms