Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
ACTN4O43707 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.89■□□□□ 0.77
ACTN4O43707 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.89■□□□□ 0.77
ACTN4O43707 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ACTN4O43707 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.89■□□□□ 0.77
ACTN4O43707 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.89■□□□□ 0.77
ACTN4O43707 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
ACTN4O43707 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ACTN4O43707 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.89■□□□□ 0.77
ACTN4O43707 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.89■□□□□ 0.77
ACTN4O43707 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ACTN4O43707 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.89■□□□□ 0.77
ACTN4O43707 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ACTN4O43707 AC022211.2-201ENST00000585075 2527 ntBASIC19.89■□□□□ 0.77
ACTN4O43707 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
ACTN4O43707 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ACTN4O43707 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.88■□□□□ 0.77
ACTN4O43707 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ACTN4O43707 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.88■□□□□ 0.77
ACTN4O43707 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ACTN4O43707 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.88■□□□□ 0.77
ACTN4O43707 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ACTN4O43707 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.88■□□□□ 0.77
ACTN4O43707 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 RCN1P1-201ENST00000400413 996 ntBASIC19.88■□□□□ 0.77
ACTN4O43707 AC096633.1-201ENST00000422446 749 ntBASIC19.88■□□□□ 0.77
ACTN4O43707 AC092647.4-201ENST00000457211 535 ntBASIC19.88■□□□□ 0.77
ACTN4O43707 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.88■□□□□ 0.77
ACTN4O43707 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.88■□□□□ 0.77
ACTN4O43707 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACTN4O43707 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACTN4O43707 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ACTN4O43707 LYSMD4-203ENST00000378904 2122 ntBASIC19.87■□□□□ 0.77
ACTN4O43707 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
ACTN4O43707 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACTN4O43707 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACTN4O43707 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACTN4O43707 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.87■□□□□ 0.77
ACTN4O43707 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACTN4O43707 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ACTN4O43707 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
ACTN4O43707 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ACTN4O43707 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACTN4O43707 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACTN4O43707 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ACTN4O43707 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.87■□□□□ 0.77
ACTN4O43707 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACTN4O43707 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACTN4O43707 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.87■□□□□ 0.77
ACTN4O43707 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
ACTN4O43707 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.86■□□□□ 0.77
ACTN4O43707 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ACTN4O43707 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
ACTN4O43707 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.86■□□□□ 0.77
ACTN4O43707 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.86■□□□□ 0.77
ACTN4O43707 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ACTN4O43707 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.86■□□□□ 0.77
ACTN4O43707 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.86■□□□□ 0.77
ACTN4O43707 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 AC022616.7-201ENST00000525383 220 ntBASIC19.86■□□□□ 0.77
ACTN4O43707 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.86■□□□□ 0.77
ACTN4O43707 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 RN7SL850P-201ENST00000579959 291 ntBASIC19.86■□□□□ 0.77
ACTN4O43707 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.86■□□□□ 0.77
ACTN4O43707 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms