Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SEMA3EO15041 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SEMA3EO15041 AL591424.1-201ENST00000442569 1213 ntBASIC21.28■■□□□ 1
SEMA3EO15041 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SEMA3EO15041 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.28■■□□□ 1
SEMA3EO15041 AC027601.4-201ENST00000611259 610 ntBASIC21.28■■□□□ 1
SEMA3EO15041 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SEMA3EO15041 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SEMA3EO15041 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SEMA3EO15041 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.28■■□□□ 1
SEMA3EO15041 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SEMA3EO15041 NEFHP1-201ENST00000412845 2629 ntBASIC21.27■■□□□ 1
SEMA3EO15041 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.27■■□□□ 1
SEMA3EO15041 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SEMA3EO15041 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.27■■□□□ 1
SEMA3EO15041 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.27■■□□□ 1
SEMA3EO15041 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.27■■□□□ 1
SEMA3EO15041 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.27■■□□□ 1
SEMA3EO15041 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SEMA3EO15041 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.27■■□□□ 1
SEMA3EO15041 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SEMA3EO15041 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.27■■□□□ 1
SEMA3EO15041 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
SEMA3EO15041 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SEMA3EO15041 FAM197Y3-203ENST00000618346 717 ntBASIC21.27■■□□□ 1
SEMA3EO15041 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.27■■□□□ 1
SEMA3EO15041 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.27■■□□□ 1
SEMA3EO15041 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SEMA3EO15041 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.27■■□□□ 1
SEMA3EO15041 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SEMA3EO15041 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.27■■□□□ 1
SEMA3EO15041 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.27■■□□□ 1
SEMA3EO15041 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SEMA3EO15041 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
SEMA3EO15041 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SEMA3EO15041 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
SEMA3EO15041 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SEMA3EO15041 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SEMA3EO15041 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.26■□□□□ 0.99
SEMA3EO15041 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.26■□□□□ 0.99
SEMA3EO15041 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SEMA3EO15041 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.26■□□□□ 0.99
SEMA3EO15041 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SEMA3EO15041 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SEMA3EO15041 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.26■□□□□ 0.99
SEMA3EO15041 POLD2P1-201ENST00000511220 997 ntBASIC21.26■□□□□ 0.99
SEMA3EO15041 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.26■□□□□ 0.99
SEMA3EO15041 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.26■□□□□ 0.99
SEMA3EO15041 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.26■□□□□ 0.99
SEMA3EO15041 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.26■□□□□ 0.99
SEMA3EO15041 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.26■□□□□ 0.99
SEMA3EO15041 AC005593.1-201ENST00000624894 515 ntBASIC21.26■□□□□ 0.99
SEMA3EO15041 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 PMS2P7-201ENST00000506558 1336 ntBASIC21.26■□□□□ 0.99
SEMA3EO15041 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.26■□□□□ 0.99
SEMA3EO15041 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEMA3EO15041 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEMA3EO15041 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEMA3EO15041 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEMA3EO15041 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEMA3EO15041 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.25■□□□□ 0.99
SEMA3EO15041 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEMA3EO15041 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.25■□□□□ 0.99
SEMA3EO15041 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEMA3EO15041 AC009947.1-201ENST00000444350 727 ntBASIC21.25■□□□□ 0.99
SEMA3EO15041 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEMA3EO15041 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.25■□□□□ 0.99
SEMA3EO15041 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEMA3EO15041 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
SEMA3EO15041 TERC-201ENST00000602385 541 ntBASIC21.25■□□□□ 0.99
SEMA3EO15041 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEMA3EO15041 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SEMA3EO15041 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SEMA3EO15041 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SEMA3EO15041 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SEMA3EO15041 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.24■□□□□ 0.99
SEMA3EO15041 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.24■□□□□ 0.99
SEMA3EO15041 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms