Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.61□□□□□ -0.23
COLCA2A8K830 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.61□□□□□ -0.23
COLCA2A8K830 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COLCA2A8K830 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.61□□□□□ -0.23
COLCA2A8K830 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
COLCA2A8K830 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
COLCA2A8K830 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COLCA2A8K830 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
COLCA2A8K830 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
COLCA2A8K830 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
COLCA2A8K830 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
COLCA2A8K830 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.6□□□□□ -0.23
COLCA2A8K830 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 PRTG-204ENST00000561292 833 ntTSL 3 BASIC13.6□□□□□ -0.23
COLCA2A8K830 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.6□□□□□ -0.23
COLCA2A8K830 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.6□□□□□ -0.23
COLCA2A8K830 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 AC005089.1-201ENST00000619486 2241 ntBASIC13.6□□□□□ -0.23
COLCA2A8K830 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.6□□□□□ -0.23
COLCA2A8K830 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COLCA2A8K830 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.6□□□□□ -0.23
COLCA2A8K830 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.6□□□□□ -0.23
COLCA2A8K830 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
COLCA2A8K830 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COLCA2A8K830 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.59□□□□□ -0.23
COLCA2A8K830 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.59□□□□□ -0.23
COLCA2A8K830 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.59□□□□□ -0.23
COLCA2A8K830 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
COLCA2A8K830 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.59□□□□□ -0.23
COLCA2A8K830 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.59□□□□□ -0.23
COLCA2A8K830 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
COLCA2A8K830 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
COLCA2A8K830 KRT8P9-201ENST00000558927 1449 ntBASIC13.59□□□□□ -0.23
COLCA2A8K830 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
COLCA2A8K830 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
COLCA2A8K830 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.59□□□□□ -0.23
COLCA2A8K830 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.59□□□□□ -0.23
COLCA2A8K830 TPRG1LP1-201ENST00000598702 760 ntBASIC13.59□□□□□ -0.23
COLCA2A8K830 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.59□□□□□ -0.23
COLCA2A8K830 AC105020.6-201ENST00000621523 1217 ntBASIC13.59□□□□□ -0.23
COLCA2A8K830 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
COLCA2A8K830 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
COLCA2A8K830 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
COLCA2A8K830 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
COLCA2A8K830 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.59□□□□□ -0.23
COLCA2A8K830 AC139749.1-202ENST00000617529 3139 ntBASIC13.59□□□□□ -0.23
COLCA2A8K830 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COLCA2A8K830 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.59□□□□□ -0.23
COLCA2A8K830 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
COLCA2A8K830 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
COLCA2A8K830 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
COLCA2A8K830 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
COLCA2A8K830 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms