Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC097374.2-201ENST00000618617 1306 ntBASIC16.17■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 GNAS-203ENST00000306120 1878 ntBASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AL133373.2-201ENST00000623187 2828 ntBASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC096633.1-201ENST00000422446 749 ntBASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC012615.1-201ENST00000565797 1299 ntBASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC026471.1-201ENST00000564629 3026 ntBASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC134043.2-201ENST00000624206 2238 ntBASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC233702.3-201ENST00000578656 1387 ntBASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 TPM4P1-201ENST00000436100 807 ntBASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 FZD10-202ENST00000539839 3282 ntBASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC012317.2-201ENST00000623305 2251 ntBASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.14■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.14■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.14■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.14■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.14■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.14■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.14■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.14■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.14■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms