Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.07■□□□□ 0.96
CYP46A1Q9Y6A2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 AL671277.2-201ENST00000458060 996 ntBASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 DUX4L26-201ENST00000489078 1255 ntBASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CYP46A1Q9Y6A2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 BX276092.7-203ENST00000637198 1536 ntBASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 LINC01238-205ENST00000567549 1107 ntBASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 CROCCP2-202ENST00000412962 2773 ntBASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.05■□□□□ 0.96
CYP46A1Q9Y6A2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 TMPOP1-202ENST00000424642 1267 ntBASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CYP46A1Q9Y6A2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms