Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 KRT18P3-201ENST00000451602 1288 ntBASIC18.07■□□□□ 0.48
EBF1Q9UH73 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 RNA5SP415-201ENST00000517246 115 ntBASIC18.07■□□□□ 0.48
EBF1Q9UH73 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
EBF1Q9UH73 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EBF1Q9UH73 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EBF1Q9UH73 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EBF1Q9UH73 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EBF1Q9UH73 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EBF1Q9UH73 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EBF1Q9UH73 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
EBF1Q9UH73 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EBF1Q9UH73 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 RPSAP43-201ENST00000402237 625 ntBASIC18.06■□□□□ 0.48
EBF1Q9UH73 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 AC040169.1-201ENST00000565382 521 ntBASIC18.06■□□□□ 0.48
EBF1Q9UH73 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EBF1Q9UH73 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
EBF1Q9UH73 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
EBF1Q9UH73 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EBF1Q9UH73 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EBF1Q9UH73 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EBF1Q9UH73 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EBF1Q9UH73 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EBF1Q9UH73 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EBF1Q9UH73 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 GPX1P2-201ENST00000429271 606 ntBASIC18.05■□□□□ 0.48
EBF1Q9UH73 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 AC105339.3-201ENST00000560043 636 ntBASIC18.05■□□□□ 0.48
EBF1Q9UH73 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 AC107918.4-202ENST00000641623 219 ntBASIC18.05■□□□□ 0.48
EBF1Q9UH73 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EBF1Q9UH73 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EBF1Q9UH73 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EBF1Q9UH73 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EBF1Q9UH73 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EBF1Q9UH73 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EBF1Q9UH73 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
EBF1Q9UH73 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
EBF1Q9UH73 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
EBF1Q9UH73 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
EBF1Q9UH73 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
EBF1Q9UH73 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms