Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL20A1Q9P218 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL20A1Q9P218 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 UNC93B6-202ENST00000528242 690 ntBASIC20.01■□□□□ 0.79
COL20A1Q9P218 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL20A1Q9P218 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL20A1Q9P218 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
COL20A1Q9P218 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL20A1Q9P218 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
COL20A1Q9P218 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20■□□□□ 0.79
COL20A1Q9P218 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20■□□□□ 0.79
COL20A1Q9P218 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20■□□□□ 0.79
COL20A1Q9P218 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 REXO1L11P-201ENST00000620964 1927 ntBASIC20■□□□□ 0.79
COL20A1Q9P218 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20■□□□□ 0.79
COL20A1Q9P218 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20■□□□□ 0.79
COL20A1Q9P218 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 MIR940-201ENST00000401276 94 ntBASIC20■□□□□ 0.79
COL20A1Q9P218 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20■□□□□ 0.79
COL20A1Q9P218 LBH-204ENST00000406087 559 ntTSL 4 BASIC20■□□□□ 0.79
COL20A1Q9P218 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20■□□□□ 0.79
COL20A1Q9P218 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20■□□□□ 0.79
COL20A1Q9P218 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
COL20A1Q9P218 Z83851.2-201ENST00000609564 659 ntBASIC20■□□□□ 0.79
COL20A1Q9P218 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
COL20A1Q9P218 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20■□□□□ 0.79
COL20A1Q9P218 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20■□□□□ 0.79
COL20A1Q9P218 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL20A1Q9P218 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.99■□□□□ 0.79
COL20A1Q9P218 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 ZNF259P1-201ENST00000407656 1365 ntBASIC19.99■□□□□ 0.79
COL20A1Q9P218 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 AC003669.1-201ENST00000334569 611 ntBASIC19.99■□□□□ 0.79
COL20A1Q9P218 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.99■□□□□ 0.79
COL20A1Q9P218 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.99■□□□□ 0.79
COL20A1Q9P218 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.99■□□□□ 0.79
COL20A1Q9P218 AL356488.2-201ENST00000602755 427 ntBASIC19.99■□□□□ 0.79
COL20A1Q9P218 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
COL20A1Q9P218 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 AC135050.7-201ENST00000624508 2218 ntBASIC19.99■□□□□ 0.79
COL20A1Q9P218 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.99■□□□□ 0.79
COL20A1Q9P218 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.99■□□□□ 0.79
COL20A1Q9P218 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL20A1Q9P218 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
COL20A1Q9P218 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.98■□□□□ 0.79
COL20A1Q9P218 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
COL20A1Q9P218 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.98■□□□□ 0.79
COL20A1Q9P218 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.98■□□□□ 0.79
COL20A1Q9P218 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.98■□□□□ 0.79
COL20A1Q9P218 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.98■□□□□ 0.79
COL20A1Q9P218 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL20A1Q9P218 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.98■□□□□ 0.79
COL20A1Q9P218 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.98■□□□□ 0.79
COL20A1Q9P218 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms