Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 KRT18P65-201ENST00000439811 1286 ntBASIC15.86■□□□□ 0.13
NELFAQ9H3P2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
NELFAQ9H3P2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 UPK3BP1-201ENST00000428678 509 ntBASIC15.85■□□□□ 0.13
NELFAQ9H3P2 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 AL121672.3-201ENST00000608644 468 ntBASIC15.85■□□□□ 0.13
NELFAQ9H3P2 AC069148.1-201ENST00000608741 768 ntBASIC15.85■□□□□ 0.13
NELFAQ9H3P2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 AC067852.2-201ENST00000590513 2313 ntBASIC15.85■□□□□ 0.13
NELFAQ9H3P2 PCDHB18P-201ENST00000524813 2368 ntBASIC15.85■□□□□ 0.13
NELFAQ9H3P2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NELFAQ9H3P2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 AP002383.4-201ENST00000442518 975 ntBASIC15.84■□□□□ 0.13
NELFAQ9H3P2 BX276092.5-203ENST00000456199 560 ntBASIC15.84■□□□□ 0.13
NELFAQ9H3P2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 NPAP1P7-201ENST00000613027 823 ntBASIC15.84■□□□□ 0.13
NELFAQ9H3P2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NELFAQ9H3P2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms