Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF38Q9H0F5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 AC106730.1-201ENST00000566722 1090 ntBASIC18.36■□□□□ 0.53
RNF38Q9H0F5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 AL353593.2-201ENST00000602529 1483 ntBASIC18.36■□□□□ 0.53
RNF38Q9H0F5 AC073592.5-201ENST00000624854 528 ntBASIC18.36■□□□□ 0.53
RNF38Q9H0F5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RNF38Q9H0F5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 AC132938.5-201ENST00000624980 1813 ntBASIC18.35■□□□□ 0.53
RNF38Q9H0F5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 SPDYE21P-201ENST00000413323 827 ntBASIC18.35■□□□□ 0.53
RNF38Q9H0F5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 IGHV3-22-201ENST00000520721 359 ntBASIC18.35■□□□□ 0.53
RNF38Q9H0F5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 AC019129.2-201ENST00000609837 1235 ntBASIC18.35■□□□□ 0.53
RNF38Q9H0F5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 AC107918.4-202ENST00000641623 219 ntBASIC18.35■□□□□ 0.53
RNF38Q9H0F5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF38Q9H0F5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 HLA-J-201ENST00000462773 1622 ntBASIC18.34■□□□□ 0.53
RNF38Q9H0F5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 SIGLEC16-201ENST00000599858 1437 ntBASIC18.34■□□□□ 0.53
RNF38Q9H0F5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 PRYP5-201ENST00000451909 266 ntBASIC18.34■□□□□ 0.53
RNF38Q9H0F5 AC092910.1-201ENST00000482027 1129 ntBASIC18.34■□□□□ 0.53
RNF38Q9H0F5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 AC116407.2-201ENST00000613639 860 ntBASIC18.34■□□□□ 0.53
RNF38Q9H0F5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 AC008735.5-201ENST00000623544 497 ntBASIC18.34■□□□□ 0.53
RNF38Q9H0F5 AL022326.1-202ENST00000641533 845 ntBASIC18.34■□□□□ 0.53
RNF38Q9H0F5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF38Q9H0F5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RNF38Q9H0F5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF38Q9H0F5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF38Q9H0F5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF38Q9H0F5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.33■□□□□ 0.53
RNF38Q9H0F5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF38Q9H0F5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms