Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CASKIN1Q8WXD9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC27.38■■□□□ 1.97
CASKIN1Q8WXD9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CASKIN1Q8WXD9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
CASKIN1Q8WXD9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CASKIN1Q8WXD9 DNAJB3-202ENST00000449667 1266 ntBASIC27.38■■□□□ 1.97
CASKIN1Q8WXD9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CASKIN1Q8WXD9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC27.38■■□□□ 1.97
CASKIN1Q8WXD9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC27.38■■□□□ 1.97
CASKIN1Q8WXD9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC27.38■■□□□ 1.97
CASKIN1Q8WXD9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CASKIN1Q8WXD9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 PDPK2P-202ENST00000562415 1191 ntBASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC27.37■■□□□ 1.97
CASKIN1Q8WXD9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 RHOQP3-201ENST00000437982 621 ntBASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CASKIN1Q8WXD9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 AC138028.4-201ENST00000564984 1845 ntBASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC27.35■■□□□ 1.97
CASKIN1Q8WXD9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 ATP6V0CP3-201ENST00000417255 467 ntBASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 PC-214ENST00000628663 1470 ntTSL 5 BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CASKIN1Q8WXD9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC27.33■■□□□ 1.97
CASKIN1Q8WXD9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC27.33■■□□□ 1.96
CASKIN1Q8WXD9 PMS2P2-201ENST00000425039 1128 ntBASIC27.33■■□□□ 1.96
CASKIN1Q8WXD9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC27.33■■□□□ 1.96
CASKIN1Q8WXD9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CASKIN1Q8WXD9 GGTLC5P-201ENST00000617623 998 ntBASIC27.33■■□□□ 1.96
CASKIN1Q8WXD9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms