Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 IGHGP-201ENST00000390555 1178 ntBASIC18.5■□□□□ 0.55
RFX6Q8HWS3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 VENTXP5-201ENST00000523979 775 ntBASIC18.5■□□□□ 0.55
RFX6Q8HWS3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 AC133963.1-201ENST00000504166 1679 ntBASIC18.5■□□□□ 0.55
RFX6Q8HWS3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX6Q8HWS3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 LINC01311-201ENST00000565162 1445 ntBASIC18.49■□□□□ 0.55
RFX6Q8HWS3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 AC104076.2-201ENST00000448912 469 ntBASIC18.49■□□□□ 0.55
RFX6Q8HWS3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 AC141586.5-201ENST00000624546 2050 ntBASIC18.49■□□□□ 0.55
RFX6Q8HWS3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.49■□□□□ 0.55
RFX6Q8HWS3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 AL353692.3-201ENST00000407031 1396 ntBASIC18.48■□□□□ 0.55
RFX6Q8HWS3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 AC112698.1-201ENST00000510299 916 ntBASIC18.48■□□□□ 0.55
RFX6Q8HWS3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
RFX6Q8HWS3 LINC00304-203ENST00000565008 1864 ntBASIC18.48■□□□□ 0.55
RFX6Q8HWS3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.47■□□□□ 0.55
RFX6Q8HWS3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX6Q8HWS3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX6Q8HWS3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX6Q8HWS3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX6Q8HWS3 AC106820.2-201ENST00000563775 3264 ntBASIC18.47■□□□□ 0.55
RFX6Q8HWS3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms