Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 AC087289.5-201ENST00000586076 3175 ntBASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 COX5BP8-201ENST00000416911 349 ntBASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 KRT17P7-201ENST00000451704 1104 ntBASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 OR7E47P-204ENST00000575924 449 ntBASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 SDHAP2-201ENST00000455183 2001 ntBASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 AC125807.1-201ENST00000483097 614 ntBASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 IGHV3-71-201ENST00000523324 359 ntBASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 AL662799.1-202ENST00000614205 422 ntBASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 LINC01126-201ENST00000623515 1646 ntBASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.1■□□□□ 0.33
RSPO4Q2I0M5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 TREML5P-201ENST00000421694 576 ntBASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 AC069335.1-201ENST00000489972 472 ntBASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 AC112191.1-201ENST00000523689 701 ntBASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 GGTLC5P-201ENST00000617623 998 ntBASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 AC006116.8-202ENST00000587620 1550 ntBASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 FP475955.4-201ENST00000623131 1990 ntBASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RSPO4Q2I0M5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RSPO4Q2I0M5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RSPO4Q2I0M5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RSPO4Q2I0M5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.08■□□□□ 0.33
RSPO4Q2I0M5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RSPO4Q2I0M5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RSPO4Q2I0M5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 MTMR9LP-203ENST00000426597 1545 ntBASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms