Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL18P55774 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 AL450487.1-201ENST00000426799 995 ntBASIC12.56□□□□□ -0.4
CCL18P55774 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.56□□□□□ -0.4
CCL18P55774 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.56□□□□□ -0.4
CCL18P55774 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL18P55774 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL18P55774 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CCL18P55774 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.56□□□□□ -0.4
CCL18P55774 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CCL18P55774 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CCL18P55774 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL18P55774 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL18P55774 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
CCL18P55774 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CCL18P55774 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CCL18P55774 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CCL18P55774 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL18P55774 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
CCL18P55774 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCL18P55774 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL18P55774 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL18P55774 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CCL18P55774 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL18P55774 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL18P55774 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 TSPY12P-201ENST00000421279 868 ntBASIC12.55□□□□□ -0.4
CCL18P55774 TPM4P1-201ENST00000436100 807 ntBASIC12.55□□□□□ -0.4
CCL18P55774 TOB2P1-201ENST00000469761 992 ntBASIC12.55□□□□□ -0.4
CCL18P55774 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL18P55774 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL18P55774 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL18P55774 AC012615.1-201ENST00000565797 1299 ntBASIC12.55□□□□□ -0.4
CCL18P55774 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL18P55774 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL18P55774 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL18P55774 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 AL121772.3-201ENST00000610840 674 ntBASIC12.55□□□□□ -0.4
CCL18P55774 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL18P55774 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL18P55774 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CCL18P55774 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
CCL18P55774 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL18P55774 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL18P55774 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL18P55774 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CCL18P55774 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL18P55774 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL18P55774 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL18P55774 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL18P55774 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL18P55774 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL18P55774 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL18P55774 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CCL18P55774 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL18P55774 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL18P55774 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CCL18P55774 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL18P55774 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL18P55774 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL18P55774 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL18P55774 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL18P55774 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL18P55774 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms