Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AL357033.4-201ENST00000617703 1807 ntBASIC19.96■□□□□ 0.79
EPHB4P54760 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB4P54760 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB4P54760 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB4P54760 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
EPHB4P54760 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
EPHB4P54760 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB4P54760 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB4P54760 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.96■□□□□ 0.79
EPHB4P54760 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.96■□□□□ 0.79
EPHB4P54760 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB4P54760 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
EPHB4P54760 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
EPHB4P54760 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.96■□□□□ 0.79
EPHB4P54760 ABALON-201ENST00000629058 1903 ntBASIC19.96■□□□□ 0.79
EPHB4P54760 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB4P54760 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.96■□□□□ 0.79
EPHB4P54760 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.95■□□□□ 0.78
EPHB4P54760 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 AC090340.1-201ENST00000620778 4980 ntBASIC19.95■□□□□ 0.78
EPHB4P54760 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
EPHB4P54760 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHB4P54760 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 HLA-J-201ENST00000462773 1622 ntBASIC19.95■□□□□ 0.78
EPHB4P54760 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHB4P54760 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
EPHB4P54760 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
EPHB4P54760 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.95■□□□□ 0.78
EPHB4P54760 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.95■□□□□ 0.78
EPHB4P54760 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
EPHB4P54760 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.95■□□□□ 0.78
EPHB4P54760 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.95■□□□□ 0.78
EPHB4P54760 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.95■□□□□ 0.78
EPHB4P54760 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB4P54760 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHB4P54760 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
EPHB4P54760 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
EPHB4P54760 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 AC112777.1-201ENST00000540175 1423 ntBASIC19.94■□□□□ 0.78
EPHB4P54760 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
EPHB4P54760 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
EPHB4P54760 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHB4P54760 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
EPHB4P54760 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
EPHB4P54760 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.94■□□□□ 0.78
EPHB4P54760 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHB4P54760 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
EPHB4P54760 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.94■□□□□ 0.78
EPHB4P54760 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.94■□□□□ 0.78
EPHB4P54760 DNAJB3-201ENST00000446806 729 ntBASIC19.94■□□□□ 0.78
EPHB4P54760 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHB4P54760 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 AC040169.1-201ENST00000565382 521 ntBASIC19.94■□□□□ 0.78
EPHB4P54760 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHB4P54760 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHB4P54760 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 INTS4P1-201ENST00000438455 1935 ntBASIC19.94■□□□□ 0.78
EPHB4P54760 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
EPHB4P54760 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB4P54760 AP005117.1-201ENST00000584346 1413 ntBASIC19.93■□□□□ 0.78
EPHB4P54760 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.93■□□□□ 0.78
EPHB4P54760 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
EPHB4P54760 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.93■□□□□ 0.78
EPHB4P54760 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.93■□□□□ 0.78
EPHB4P54760 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.93■□□□□ 0.78
EPHB4P54760 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
EPHB4P54760 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
EPHB4P54760 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB4P54760 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms