Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.67■□□□□ 0.26
SMSP52788 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 AC012317.2-201ENST00000623305 2251 ntBASIC16.67■□□□□ 0.26
SMSP52788 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SMSP52788 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 KRT18P1-202ENST00000452408 1331 ntBASIC16.67■□□□□ 0.26
SMSP52788 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMSP52788 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SMSP52788 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.66■□□□□ 0.26
SMSP52788 AC099398.1-201ENST00000567919 2776 ntBASIC16.66■□□□□ 0.26
SMSP52788 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SMSP52788 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SMSP52788 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SMSP52788 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SMSP52788 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.66■□□□□ 0.26
SMSP52788 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SMSP52788 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SMSP52788 AC036111.1-201ENST00000533973 1582 ntBASIC16.66■□□□□ 0.26
SMSP52788 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.66■□□□□ 0.26
SMSP52788 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMSP52788 MIR3180-1-201ENST00000580374 94 ntBASIC16.66■□□□□ 0.26
SMSP52788 MIR3180-3-201ENST00000584616 94 ntBASIC16.66■□□□□ 0.26
SMSP52788 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.66■□□□□ 0.26
SMSP52788 AL121772.3-201ENST00000610840 674 ntBASIC16.66■□□□□ 0.26
SMSP52788 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.66■□□□□ 0.26
SMSP52788 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SMSP52788 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SMSP52788 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 PHGDH-209ENST00000641074 1780 ntBASIC16.66■□□□□ 0.26
SMSP52788 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SMSP52788 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.66■□□□□ 0.26
SMSP52788 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.66■□□□□ 0.26
SMSP52788 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMSP52788 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.65■□□□□ 0.26
SMSP52788 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SMSP52788 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SMSP52788 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 AL023284.2-201ENST00000405850 579 ntBASIC16.65■□□□□ 0.26
SMSP52788 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.65■□□□□ 0.26
SMSP52788 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.65■□□□□ 0.26
SMSP52788 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.65■□□□□ 0.26
SMSP52788 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMSP52788 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SMSP52788 AC112497.1-201ENST00000624824 639 ntBASIC16.65■□□□□ 0.26
SMSP52788 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.65■□□□□ 0.26
SMSP52788 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMSP52788 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SMSP52788 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMSP52788 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMSP52788 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMSP52788 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SMSP52788 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMSP52788 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.64■□□□□ 0.25
SMSP52788 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.64■□□□□ 0.25
SMSP52788 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 AC139713.2-201ENST00000641328 2723 ntBASIC16.64■□□□□ 0.25
SMSP52788 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.64■□□□□ 0.25
SMSP52788 AC034236.2-201ENST00000606662 1610 ntBASIC16.64■□□□□ 0.25
SMSP52788 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.64■□□□□ 0.25
SMSP52788 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.64■□□□□ 0.25
SMSP52788 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SMSP52788 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMSP52788 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms